RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 VPS28Q9UK41 221 aa8.69□□□□□ -1.02
TDP1-201ENST00000335725 ACOT9Q9Y305 439 aa8.69□□□□□ -1.02
TDP1-201ENST00000335725 PCDHB12Q9Y5F1 795 aa8.69□□□□□ -1.02
TDP1-201ENST00000335725 DGKBQ9Y6T7 804 aa8.69□□□□□ -1.02
TDP1-201ENST00000335725 PIK3C2AO00443 1686 aa8.69□□□□□ -1.02
TDP1-201ENST00000335725 A0A1B0GUL6 1792 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 A0A1B0GTQ1 180 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 CCDC182A6NF36 153 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 STX7O15400 261 aaKnown RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 ZBTB14O43829 449 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 DHRS4L1P0CG22 281 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 RALBP11234 206 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 PRKAR2AP13861 404 aaKnown RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 HOXA6P31267 233 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 MCM7P33993 719 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 PCP4P48539 62 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 POU3F4P49335 361 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 RNF4P78317 190 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 ZNF174Q15697 407 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 TRIM72Q6ZMU5 477 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 VN1R5Q7Z5H4 357 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 SGMS1Q86VZ5 419 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 SLC13A5Q86YT5 568 aaPredicted RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 SFRP1Q8N474 314 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 BPIFB6Q8NFQ5 453 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 SLC35G2Q8TBE7 412 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 DNAJA4Q8WW22 397 aaPredicted RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 ZHX1-C8orf76Q96EF9 292 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 APOL4Q9BPW4 351 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 RACGAP1Q9H0H5 632 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 APEX2Q9UBZ4 518 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 FARP1Q9Y4F1 1045 aaPredicted RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 KIAA0556O60303 1618 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 SLIT3O75094 1523 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 A0A1W2PPM1 405 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 ZBTB24O43167 697 aaPredicted RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 SYNCRIPO60506 623 aaKnown RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 JUNP05412 331 aaKnown RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 FMO4P31512 558 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 GBX2P52951 348 aaPredicted RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 MAPK10P53779 464 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 PSMD4P55036 377 aaKnown RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 HAND2P61296 217 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 ZNF273Q14593 569 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 KCNJ11Q14654 390 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 NCF4Q15080 339 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 TAB1Q15750 504 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 CHRNA2Q15822 529 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 NHSL2Q5HYW2 709 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 C16orf46Q6P387 395 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 BANPQ8N9N5 519 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 OR7A2PQ8NGA2 310 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 OR52H1Q8NGJ2 320 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 XAGE3Q8WTP9 111 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 RNF170Q96K19 258 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 SNX15Q9NRS6 342 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 CD274Q9NZQ7 290 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 CLTCQ00610 1675 aaKnown RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 PARP4Q9UKK3 1724 aaKnown RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 TFECO14948 347 aaPredicted RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 ZNF623O75123 536 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 PRKAR1AP10644 381 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 ACADMP11310 421 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 CYP2A6P11509 494 aaPredicted RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 CHRNB2P17787 502 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 TNNI3P19429 210 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 TCN1P20061 433 aaPredicted RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 GARSP41250 739 aaKnown RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 ARFIP1P53367 373 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 ABCE1P61221 599 aaKnown RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 ERV3-1Q14264 604 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 IQCCQ4KMZ1 466 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 C5orf46Q6UWT4 87 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 DENND5BQ6ZUT9 1274 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 RNF180Q86T96 592 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 LINC00523Q86TU6 105 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 MFSD2AQ8NA29 543 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 BHLHE22Q8NFJ8 381 aaPredicted RBP8.68□□□□□ -1.02
TDP1-201ENST00000335725 OR7G3Q8NG95 312 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 SHKBP1Q8TBC3 707 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 URGCPQ8TCY9 931 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 ASZ1Q8WWH4 475 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 TEKT3Q9BXF9 490 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 SLC13A1Q9BZW2 595 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 EXTL2Q9UBQ6 330 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 PCDHGA2Q9Y5H1 932 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 SNCAIPQ9Y6H5 919 aa8.68□□□□□ -1.02
TDP1-201ENST00000335725 LOC102724428A0A0B4J2F2 783 aa8.67□□□□□ -1.02
TDP1-201ENST00000335725 PQLC2LA1A4F0 135 aa8.67□□□□□ -1.02
TDP1-201ENST00000335725 PDHXO00330 501 aa8.67□□□□□ -1.02
TDP1-201ENST00000335725 NPM3O75607 178 aaKnown RBP8.67□□□□□ -1.02
TDP1-201ENST00000335725 MT-ND3P03897 115 aa8.67□□□□□ -1.02
TDP1-201ENST00000335725 C7P10643 843 aa8.67□□□□□ -1.02
TDP1-201ENST00000335725 GCAP28676 217 aa8.67□□□□□ -1.02
TDP1-201ENST00000335725 GRM5P41594 1212 aa8.67□□□□□ -1.02
TDP1-201ENST00000335725 GALCP54803 685 aa8.67□□□□□ -1.02
TDP1-201ENST00000335725 SIK1P57059 783 aa8.67□□□□□ -1.02
TDP1-201ENST00000335725 ERVFC1P60507 584 aa8.67□□□□□ -1.02
TDP1-201ENST00000335725 BTN1A1Q13410 526 aa8.67□□□□□ -1.02
TDP1-201ENST00000335725 ADAM15Q13444 863 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms