RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 USP6NLQ92738 828 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 HEPHQ9BQS7 1158 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 C17orf80Q9BSJ5 609 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 THUMPD3Q9BV44 507 aaKnown RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 GBA3Q9H227 469 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 HEY2Q9UBP5 337 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 MAPRE3Q9UPY8 281 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 DDX60Q8IY21 1712 aaKnown RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 MTMR11A4FU01 709 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 MEI4A8MW99 385 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 FAM153BP0C7A2 387 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 ALADP13716 330 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 BGNP21810 368 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 TAF5Q15542 800 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 FAM153CQ494X1 144 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 MARK2Q7KZI7 788 aaKnown RBP11.31□□□□□ -0.6
POLR1B-202ENST00000333990 TNS4Q8IZW8 715 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 OR7D4Q8NG98 312 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 SLC35F5Q8WV83 523 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 OVCA2Q8WZ82 227 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 TWNKQ96RR1 684 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 POLMQ9NP87 494 aaPredicted RBP11.31□□□□□ -0.6
POLR1B-202ENST00000333990 HMGXB4Q9UGU5 601 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 EVLQ9UI08 416 aaPredicted RBP11.31□□□□□ -0.6
POLR1B-202ENST00000333990 SLC27A6Q9Y2P4 619 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 PCDHB1Q9Y5F3 818 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 INSL5Q9Y5Q6 135 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 A0A0U1RQJ8 604 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 LRRC72A6NJI9 287 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 F8W810 466 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 PRMT5O14744 637 aaPredicted RBP11.31□□□□□ -0.6
POLR1B-202ENST00000333990 PHGDHO43175 533 aaKnown RBP11.31□□□□□ -0.6
POLR1B-202ENST00000333990 GPR32O75388 356 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 RB1P06400 928 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 FECHP22830 423 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 AQP5P55064 265 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 CYP4F8P98187 520 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 IRF8Q02556 426 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 DMTNQ08495 405 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 GALNT3Q14435 633 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 CNGA3Q16281 694 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 POM121L1PQ3SYA9 428 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 DRICH1Q6PGQ1 229 aaPredicted RBP11.31□□□□□ -0.6
POLR1B-202ENST00000333990 CRELD2Q6UXH1 353 aaPredicted RBP11.31□□□□□ -0.6
POLR1B-202ENST00000333990 CELF5Q8N6W0 485 aaKnown RBP11.31□□□□□ -0.6
POLR1B-202ENST00000333990 STYXQ8WUJ0 223 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 PPP1R10Q96QC0 940 aaKnown RBP11.31□□□□□ -0.6
POLR1B-202ENST00000333990 SCOCQ9UIL1 159 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 KANSL1LA0AUZ9 987 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 SYNDIG1LA6NDD5 238 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 RASSF10A6NK89 507 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 UBDO15205 165 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 AP2A1O95782 977 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 PIRTP0C851 137 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 AMD1P17707 334 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 HCAR3P49019 387 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 CRADDP78560 199 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 RASIP1Q5U651 963 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 B3GALT6Q96L58 329 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 ZNF599Q96NL3 588 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 THTPAQ9BU02 230 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 MIR1-1HGQ9H1L0 117 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 MID1IP1Q9NPA3 183 aa11.31□□□□□ -0.6
POLR1B-202ENST00000333990 FBXO6Q9NRD1 293 aaPredicted RBP11.31□□□□□ -0.6
POLR1B-202ENST00000333990 MYADML2A6NDP7 307 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 CD3EAPO15446 510 aaKnown RBP11.3□□□□□ -0.6
POLR1B-202ENST00000333990 CCDC166P0CW27 439 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 ATP5F1P24539 256 aaPredicted RBP11.3□□□□□ -0.6
POLR1B-202ENST00000333990 MC4RP32245 332 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 HOXD13P35453 343 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 MAGEA9P43362 315 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 NCALDP61601 193 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 CEP68Q76N32 757 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 PATL1Q86TB9 770 aaKnown RBP11.3□□□□□ -0.6
POLR1B-202ENST00000333990 ZNF398Q8TD17 642 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 SLC22A17Q8WUG5 538 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 MCCC1Q96RQ3 725 aaPredicted RBP11.3□□□□□ -0.6
POLR1B-202ENST00000333990 HSD3B7Q9H2F3 369 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 KIAA0100Q14667 2235 aaKnown RBP11.3□□□□□ -0.6
POLR1B-202ENST00000333990 GCATO75600 419 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 MTHFRP42898 656 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 CCR3P51677 355 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 RAB10P61026 200 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 PDGFRLQ15198 375 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 KRT78Q8N1N4 520 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 TRIML2Q8N7C3 387 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 C12orf50Q8NA57 414 aaPredicted RBP11.3□□□□□ -0.6
POLR1B-202ENST00000333990 ZNF784Q8NCA9 323 aaPredicted RBP11.3□□□□□ -0.6
POLR1B-202ENST00000333990 CEP70Q8NHQ1 597 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 AUTS2Q8WXX7 1259 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 FAM162AQ96A26 154 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 DPY30Q9C005 99 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 SMOC2Q9H3U7 446 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 BPIFA1Q9NP55 256 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 TCF7L2Q9NQB0 619 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 MAN1C1Q9NR34 630 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 INSIG1O15503 277 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 RPP40O75818 363 aaKnown RBP11.3□□□□□ -0.6
POLR1B-202ENST00000333990 SLC1A6P48664 564 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 CDC16Q13042 620 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms