RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 PSKH2Q96QS6 385 aa17.15■□□□□ 0.34
SSR4-201ENST00000320857 KCNK13Q9HB14 408 aa17.15■□□□□ 0.34
SSR4-201ENST00000320857 TRPC7Q9HCX4 862 aa17.15■□□□□ 0.34
SSR4-201ENST00000320857 SLC40A1Q9NP59 571 aa17.15■□□□□ 0.34
SSR4-201ENST00000320857 ZFP69BQ9UJL9 534 aa17.15■□□□□ 0.34
SSR4-201ENST00000320857 FBXO5Q9UKT4 447 aa17.15■□□□□ 0.34
SSR4-201ENST00000320857 TTC24A2A3L6 582 aaPredicted RBP17.14■□□□□ 0.33
SSR4-201ENST00000320857 MROH6A6NGR9 719 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 MUSKO15146 869 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 TSPAN3O60637 253 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 CTSAP10619 480 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 COL6A2P12110 1019 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 KCNA4P22459 653 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 CES1P23141 567 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 GABRB3P28472 473 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 CRABP2P29373 138 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 SLC1A2P43004 574 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 CSRP3P50461 194 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 SMAD3P84022 425 aaKnown RBP17.14■□□□□ 0.33
SSR4-201ENST00000320857 CTBP1Q13363 440 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 SLC12A1Q13621 1099 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 IHHQ14623 411 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 ZNF470Q6ECI4 717 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 TMEM150AQ86TG1 271 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 C10orf107Q8IVU9 208 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 LMNTD2Q8IXW0 634 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 PLD6Q8N2A8 252 aaKnown RBP17.14■□□□□ 0.33
SSR4-201ENST00000320857 CLP1Q92989 425 aaKnown RBP17.14■□□□□ 0.33
SSR4-201ENST00000320857 ACE2Q9BYF1 805 aaPredicted RBP17.14■□□□□ 0.33
SSR4-201ENST00000320857 ZNF334Q9HCZ1 680 aaPredicted RBP17.14■□□□□ 0.33
SSR4-201ENST00000320857 SMPD4Q9NXE4 827 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 INSL6Q9Y581 213 aa17.14■□□□□ 0.33
SSR4-201ENST00000320857 FAM95CA0A1B0GW59 222 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 E2F8A0AVK6 867 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 TYW5A2RUC4 315 aaKnown RBP17.13■□□□□ 0.33
SSR4-201ENST00000320857 SLC7A4O43246 635 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 UNC5CO95185 931 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 MYL2P10916 166 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 CA8P35219 290 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 SGSHP51688 502 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 ZBTB16Q05516 673 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 ILF2Q12905 390 aaKnown RBP17.13■□□□□ 0.33
SSR4-201ENST00000320857 DLG2Q15700 870 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 CES4AQ5XG92 561 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 ZCCHC23Q6ZST2 131 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 SLC41A1Q8IVJ1 513 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 ARID3BQ8IVW6 561 aaPredicted RBP17.13■□□□□ 0.33
SSR4-201ENST00000320857 OR52K2Q8NGK3 314 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 RDH11Q8TC12 318 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 PEX13Q92968 403 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 WBP2Q969T9 261 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 KLHL29Q96CT2 875 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 SIKE1Q9BRV8 207 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 IL21Q9HBE4 155 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 NMRAL1Q9HBL8 299 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 SAR1AQ9NR31 198 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 ZNF358Q9NW07 568 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 HEY2Q9UBP5 337 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 DNAJC6O75061 913 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 H2AFYO75367 372 aaKnown RBP17.13■□□□□ 0.33
SSR4-201ENST00000320857 NDST3O95803 873 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 RALBP11234 206 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 SAT1P21673 171 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 SLC1A6P48664 564 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 RAB10P61026 200 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 IRF9Q00978 393 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 TMEM240Q5SV17 173 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 RNF219Q5W0B1 726 aaPredicted RBP17.13■□□□□ 0.33
SSR4-201ENST00000320857 GALNT7Q86SF2 657 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 MTDHQ86UE4 582 aaKnown RBP17.13■□□□□ 0.33
SSR4-201ENST00000320857 HJURPQ8NCD3 748 aaPredicted RBP17.13■□□□□ 0.33
SSR4-201ENST00000320857 ACVR1CQ8NER5 493 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 PPP4R1Q8TF05 950 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 ZFRQ96KR1 1074 aaKnown RBP17.13■□□□□ 0.33
SSR4-201ENST00000320857 ZBED2Q9BTP6 218 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 TUBB6Q9BUF5 446 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 WWP1Q9H0M0 922 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 MUC3BQ9H195 1237 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 MFSD1Q9H3U5 465 aa17.13■□□□□ 0.33
SSR4-201ENST00000320857 RASSF9O75901 435 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 OLFM2O95897 454 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 ATP5BP06576 529 aaKnown RBP17.12■□□□□ 0.33
SSR4-201ENST00000320857 STMN1P16949 149 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 HDCP19113 662 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 MAGEA10P43363 369 aaPredicted RBP17.12■□□□□ 0.33
SSR4-201ENST00000320857 CLCN5P51795 746 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 SLC12A2P55011 1212 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 PRAMEP78395 509 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 POU4F1Q01851 419 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 FBXW10Q5XX13 1052 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 CCDC149Q6ZUS6 474 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 ARL14EPQ8N8R7 260 aaPredicted RBP17.12■□□□□ 0.33
SSR4-201ENST00000320857 KLHL23Q8NBE8 558 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 OR13J1Q8NGT2 312 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 MRPS31Q92665 395 aaKnown RBP17.12■□□□□ 0.33
SSR4-201ENST00000320857 ELMO2Q96JJ3 720 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 CXXC1Q9P0U4 656 aaPredicted RBP17.12■□□□□ 0.33
SSR4-201ENST00000320857 RIMKLBQ9ULI2 386 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 ACOT9Q9Y305 439 aa17.12■□□□□ 0.33
SSR4-201ENST00000320857 ARIH1Q9Y4X5 557 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms