RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 SLC39A12Q504Y0 691 aa13.92□□□□□ -0.18
ATG4C-201ENST00000317868 MS4A13Q5J8X5 152 aa13.92□□□□□ -0.18
ATG4C-201ENST00000317868 CLLU1OSQ5K130 101 aa13.92□□□□□ -0.18
ATG4C-201ENST00000317868 SH2D4BQ5SQS7 431 aa13.92□□□□□ -0.18
ATG4C-201ENST00000317868 ZNF470Q6ECI4 717 aa13.92□□□□□ -0.18
ATG4C-201ENST00000317868 RGMBQ6NW40 437 aa13.92□□□□□ -0.18
ATG4C-201ENST00000317868 SETD3Q86TU7 594 aaPredicted RBP13.92□□□□□ -0.18
ATG4C-201ENST00000317868 SAPCD2Q86UD0 394 aa13.92□□□□□ -0.18
ATG4C-201ENST00000317868 HEXDCQ8WVB3 486 aa13.92□□□□□ -0.18
ATG4C-201ENST00000317868 LINC01599Q8WXQ3 324 aa13.92□□□□□ -0.18
ATG4C-201ENST00000317868 OLFM1Q99784 485 aa13.92□□□□□ -0.18
ATG4C-201ENST00000317868 ARHGAP39Q9C0H5 1083 aa13.92□□□□□ -0.18
ATG4C-201ENST00000317868 LOC100653049A0A140TA62 436 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 PMPCBO75439 489 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 ZMPSTE24O75844 475 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 KRT34O76011 436 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 IGLV3-27P01718 113 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 CPB1P15086 417 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 EPHA3P29320 983 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 IZUMO2Q6UXV1 221 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 ZNF280BQ86YH2 543 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 PDSS2Q86YH6 399 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 NUP93Q8N1F7 819 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 PYDC1Q8WXC3 89 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 UBXN10Q96LJ8 280 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 ZBTB26Q9HCK0 441 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 NUDT5Q9UKK9 219 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 ADAMTS6Q9UKP5 1117 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 ASB3Q9Y575 518 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 TADA2AO75478 443 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 EOMESO95936 686 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 HSPA1AP0DMV8 641 aaKnown RBP13.91□□□□□ -0.18
ATG4C-201ENST00000317868 HSPA1BP0DMV9 641 aaKnown RBP13.91□□□□□ -0.18
ATG4C-201ENST00000317868 SLC2A3P11169 496 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 MAGEA11P43364 429 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 XIAPP98170 497 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 CACNB2Q08289 660 aaPredicted RBP13.91□□□□□ -0.18
ATG4C-201ENST00000317868 ASPHQ12797 758 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 RFTN1Q14699 578 aaPredicted RBP13.91□□□□□ -0.18
ATG4C-201ENST00000317868 RBM20Q5T481 1227 aaKnown RBP13.91□□□□□ -0.18
ATG4C-201ENST00000317868 NEPROQ6NW34 567 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 CNSTQ6PJW8 725 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 CHSY3Q70JA7 882 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 PIWIL4Q7Z3Z4 852 aaKnown RBP13.91□□□□□ -0.18
ATG4C-201ENST00000317868 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.91□□□□□ -0.18
ATG4C-201ENST00000317868 SPDL1Q96EA4 605 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 TTC1Q99614 292 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 NUF2Q9BZD4 464 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 ACSS2Q9NR19 701 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 STK39Q9UEW8 545 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 CDYLQ9Y232 598 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 GOLGA8QA0A0J9YX86 632 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 GOLGA8OA6NCC3 632 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 GOLGA8NF8WBI6 632 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 CLCN5P51795 746 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 EPHB1P54762 984 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 USP46P62068 366 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 FAM189BP81408 668 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 ACVR1Q04771 509 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 GALNT1Q10472 559 aaPredicted RBP13.91□□□□□ -0.18
ATG4C-201ENST00000317868 ZNF789Q5FWF6 425 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 PIGGQ5H8A4 983 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 NOMO2Q5JPE7 1267 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 PPM1LQ5SGD2 360 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 TMEM154Q6P9G4 183 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 AGR3Q8TD06 166 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 HMCESQ96FZ2 354 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 ELMO2Q96JJ3 720 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 SCYL1Q96KG9 808 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 FBXO44Q9H4M3 255 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 CYP4F11Q9HBI6 524 aa13.91□□□□□ -0.18
ATG4C-201ENST00000317868 HTTP42858 3142 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 BRCA2P51587 3418 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 SDHDO14521 159 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 HAPLN1P10915 354 aaPredicted RBP13.9□□□□□ -0.18
ATG4C-201ENST00000317868 ATP5F1P24539 256 aaPredicted RBP13.9□□□□□ -0.18
ATG4C-201ENST00000317868 GPR15P49685 360 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 RENBPP51606 427 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 KPNA2P52292 529 aaKnown RBP13.9□□□□□ -0.18
ATG4C-201ENST00000317868 MRPL58Q14197 206 aaKnown RBP13.9□□□□□ -0.18
ATG4C-201ENST00000317868 ACAD11Q709F0 780 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 ARRDC2Q8TBH0 407 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 CALML6Q8TD86 181 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 ZYG11BQ9C0D3 744 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 LOC285095A0A1B0GVY8 99 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 MAGEA13PA6NCF6 341 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 DRGXA6NNA5 263 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 J3KR12 359 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 MOCS2O96007 188 aaPredicted RBP13.9□□□□□ -0.18
ATG4C-201ENST00000317868 ATXN1LP0C7T5 689 aaKnown RBP13.9□□□□□ -0.18
ATG4C-201ENST00000317868 SAT1P21673 171 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 SERPINH1P50454 418 aaKnown RBP13.9□□□□□ -0.18
ATG4C-201ENST00000317868 RPL26P61254 145 aaKnown RBP13.9□□□□□ -0.18
ATG4C-201ENST00000317868 SLC10A7Q0GE19 358 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 ZNF423Q2M1K9 1284 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 ALFQ53S48 1182 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 C16orf89Q6UX73 402 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 SNX32Q86XE0 403 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 CILP2Q8IUL8 1156 aa13.9□□□□□ -0.18
ATG4C-201ENST00000317868 DCP1BQ8IZD4 617 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms