RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 STRIP2Q9ULQ0 834 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 WBP11Q9Y2W2 641 aaKnown RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 CACNG2Q9Y698 323 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 PATJQ8NI35 1801 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 CENPXA8MT69 81 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 H0Y858 1186 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 SPOPO43791 374 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 SERPINI2O75830 405 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 DNAJB5O75953 348 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 KCNH1O95259 989 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 SGPL1O95470 568 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 HMGN1P05114 100 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 CYP3A5P20815 502 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 EPHA3P29320 983 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 SSTR3P32745 418 aaPredicted RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 RPL34P49207 117 aaKnown RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 NRF1Q16656 503 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 HSF5Q4G112 596 aaPredicted RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 ATAD3CQ5T2N8 411 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 CYP4F22Q6NT55 531 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 PPIL6Q8IXY8 311 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 ARRDC4Q8NCT1 418 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 OR7D4Q8NG98 312 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 DCAKDQ8WVC6 231 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 LPGAT1Q92604 370 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 HTRA1Q92743 480 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 FAM149B1Q96BN6 582 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 MASTLQ96GX5 879 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 PWWP2AQ96N64 755 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 KCNK16Q96T55 309 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 CGRRF1Q99675 332 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 PKP2Q99959 881 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 TMEM121Q9BTD3 319 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 NIFKQ9BYG3 293 aaKnown RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 PITHD1Q9GZP4 211 aaPredicted RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 POLR1BQ9H9Y6 1135 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 HOMER2Q9NSB8 354 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 FAM105AQ9NUU6 356 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 SLC39A1Q9NY26 324 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 NXF1Q9UBU9 619 aaKnown RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 BOLA1Q9Y3E2 137 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 WDR64B1ANS9 1081 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 E5RJQ4 531 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 ADAM11O75078 769 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 DAB1O75553 588 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 UGT2B4P06133 528 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 RPL10P27635 214 aaKnown RBP6.71□□□□□ -1.33
ZNF540-201ENST00000316433 L1CAMP32004 1257 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 GJC1P36383 396 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 MAGEA11P43364 429 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 MAGEA12P43365 314 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 LEPRP48357 1165 aaKnown RBP6.71□□□□□ -1.33
ZNF540-201ENST00000316433 MARCKSL1P49006 195 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 NPY2RP49146 381 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 CSRP3P50461 194 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 MRPS22P82650 360 aaKnown RBP6.71□□□□□ -1.33
ZNF540-201ENST00000316433 SCRN3Q0VDG4 424 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 MAMLD1Q13495 774 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 MAPK11Q15759 364 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 ZFP69Q49AA0 526 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 AASDHQ4L235 1098 aaPredicted RBP6.71□□□□□ -1.33
ZNF540-201ENST00000316433 SLC39A4Q6P5W5 647 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 GJB7Q6PEY0 223 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 NUDCD3Q8IVD9 361 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 CCDC60Q8IWA6 550 aaPredicted RBP6.71□□□□□ -1.33
ZNF540-201ENST00000316433 DEFB107AQ8IZN7 70 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 FAM47BQ8NA70 645 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 TP53I13Q8NBR0 393 aaPredicted RBP6.71□□□□□ -1.33
ZNF540-201ENST00000316433 SGK3Q96BR1 496 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 APOPT1Q96IL0 206 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 ZNF577Q9BSK1 485 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 ANKRD60Q9BZ19 345 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 MCCC2Q9HCC0 563 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 MRPL40Q9NQ50 206 aaKnown RBP6.71□□□□□ -1.33
ZNF540-201ENST00000316433 EIF2B3Q9NR50 452 aaKnown RBP6.71□□□□□ -1.33
ZNF540-201ENST00000316433 DTLQ9NZJ0 730 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 SLC17A7Q9P2U7 560 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 ITGA11Q9UKX5 1188 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 PSME2Q9UL46 239 aa6.71□□□□□ -1.33
ZNF540-201ENST00000316433 GPR25O00155 361 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 TSPAN4O14817 238 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 DGAT1O75907 488 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 KCNK2O95069 426 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 NTRK1P04629 796 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 MTHFD1P11586 935 aaKnown RBP6.71□□□□□ -1.34
ZNF540-201ENST00000316433 BGNP21810 368 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 IL10P22301 178 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 LRPAP1P30533 357 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 MAPK4P31152 587 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 PRKAR1BP31321 381 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 CDKN2BP42772 138 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 PSMD8P48556 350 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 MAPK10P53779 464 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 SLC12A2P55011 1212 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 YWHAEP62258 255 aaKnown RBP6.71□□□□□ -1.34
ZNF540-201ENST00000316433 TNFAIP2Q03169 654 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 TBRG1Q3YBR2 411 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 YIF1BQ5BJH7 314 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 PPP1R26Q5T8A7 1209 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms