RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 CBFA2T2O43439 604 aa17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 MMP20O60882 483 aa17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 AMPD1P23109 780 aa17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 EIF4A3P38919 411 aaKnown RBP17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 DPYSQ14117 519 aa17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 PIGHQ14442 188 aaPredicted RBP17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 TXNRD3NBQ6F5E7 133 aa17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 ABI3BPQ7Z7G0 1075 aa17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 ARHGAP12Q8IWW6 846 aa17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 TP53INP2Q8IXH6 220 aa17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 TSEN2Q8NCE0 465 aaKnown RBP17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 CXorf40AQ8TE69 158 aa17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 BMFQ96LC9 184 aa17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 CINPQ9BW66 212 aaPredicted RBP17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 KLHL11Q9NVR0 708 aa17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 IP6K2Q9UHH9 426 aa17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 ZMIZ1Q9ULJ6 1067 aa17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 WDFY3Q8IZQ1 3526 aa17.23■□□□□ 0.35
HMGCLL1-202ENST00000308161 FAM149AA5PLN7 773 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 AREL1O15033 823 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 CYP1A2P05177 515 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 RARAP10276 462 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 TIMP2P16035 220 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 RGRP47804 291 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 ZNF135P52742 658 aaPredicted RBP17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 SEMG2Q02383 582 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 KRT81Q14533 505 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 ACAP1Q15027 740 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 DPYSL2Q16555 572 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 BOLA3Q53S33 107 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 KYAT3Q6YP21 454 aaKnown RBP17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 C1QTNF2Q9BXJ5 285 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 DEF6Q9H4E7 631 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 UCKL1Q9NWZ5 548 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 CTTNBP2NLQ9P2B4 639 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 HS3ST3A1Q9Y663 406 aa17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 KMT2BQ9UMN6 2715 aaPredicted RBP17.22■□□□□ 0.35
HMGCLL1-202ENST00000308161 MYO1FO00160 1098 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 TM7SF2O76062 418 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 PRKCGP05129 697 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 DGKAP23743 735 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 RABIFP47224 123 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 HCAR3P49019 387 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 CLDN6P56747 220 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 PDE1CQ14123 709 aaPredicted RBP17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 HS1BP3Q53T59 392 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 AFMIDQ63HM1 303 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 SPECC1LQ69YQ0 1117 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 TMCO3Q6UWJ1 677 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 KANSL1Q7Z3B3 1105 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 POLNQ7Z5Q5 900 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 SRLQ86TD4 932 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 ZSCAN30Q86W11 494 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 CAMK1DQ8IU85 385 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 ZNF564Q8TBZ8 553 aaPredicted RBP17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 CSPG4P5Q96PW8 444 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 KLF6Q99612 283 aaPredicted RBP17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 CPEB1Q9BZB8 566 aaKnown RBP17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 SUV39H2Q9H5I1 410 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 ETNK2Q9NVF9 386 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 DKK3Q9UBP4 350 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 COQ6Q9Y2Z9 468 aa17.21■□□□□ 0.35
HMGCLL1-202ENST00000308161 FAM221BA6H8Z2 402 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 TMEM8BA6NDV4 472 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 SIGLEC6O43699 453 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 RFPL3O75679 317 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 DKK1O94907 266 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 SERPINA4P29622 427 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 CDH6P55285 790 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 IL10RBQ08334 325 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 GRM3Q14832 879 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 CCNI2Q6ZMN8 369 aaPredicted RBP17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 TMPRSS7Q7RTY8 843 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 GALNT15Q8N3T1 639 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 SLC25A45Q8N413 288 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 LZTR1Q8N653 840 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 NIPA2Q8N8Q9 360 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 KDF1Q8NAX2 398 aaPredicted RBP17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 FAM174AQ8TBP5 190 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 PACSIN1Q9BY11 444 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 ATP13A3Q9H7F0 1226 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 PCDH18Q9HCL0 1135 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 PCDH12Q9NPG4 1184 aa17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 ZNHIT6Q9NWK9 470 aaKnown RBP17.21■□□□□ 0.34
HMGCLL1-202ENST00000308161 TMEM110-MUSTN1A8MSY1 372 aa17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 TRIM38O00635 465 aa17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 BUB1BO60566 1050 aaPredicted RBP17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 PIAS2O75928 621 aa17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 TPM1P09493 284 aa17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 ACADVLP49748 655 aa17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 SCNN1BP51168 640 aa17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 THOP1P52888 689 aa17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 DAB2P98082 770 aa17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 SLC25A11Q02978 314 aaKnown RBP17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 ELP6Q0PNE2 266 aa17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 FZD2Q14332 565 aa17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 ZNF235Q14590 738 aa17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 LBRQ14739 615 aaKnown RBP17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 HADHQ16836 314 aaKnown RBP17.2■□□□□ 0.34
HMGCLL1-202ENST00000308161 UGP2Q16851 508 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms