RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CES3Q6UWW8 571 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 LINC00523Q86TU6 105 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 GSDMBQ8TAX9 411 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 OSCP1Q8WVF1 389 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 SMARCD2Q92925 531 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 OTUB2Q96DC9 234 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 FCRL3Q96P31 734 aaPredicted RBP7.05□□□□□ -1.28
PTCD2-201ENST00000308077 PPP1R2P1Q96PQ5 205 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 DHRS4Q9BTZ2 278 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 FSD1LQ9BXM9 530 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 S1PR5Q9H228 398 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 VPS45Q9NRW7 570 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 WDR70Q9NW82 654 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 BFARQ9NZS9 450 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 MARK1Q9P0L2 795 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 KIAA1522Q9P206 1035 aaPredicted RBP7.05□□□□□ -1.28
PTCD2-201ENST00000308077 TBK1Q9UHD2 729 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 LGALS13Q9UHV8 139 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 FCF1Q9Y324 198 aaKnown RBP7.05□□□□□ -1.28
PTCD2-201ENST00000308077 PRRC2BQ5JSZ5 2229 aaKnown RBP7.04□□□□□ -1.28
PTCD2-201ENST00000308077 MYO18BQ8IUG5 2567 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 TRIM24O15164 1050 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 RGS16O15492 202 aaPredicted RBP7.04□□□□□ -1.28
PTCD2-201ENST00000308077 SMAD6O43541 496 aaKnown RBP7.04□□□□□ -1.28
PTCD2-201ENST00000308077 IVLP07476 585 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 GSTA2P09210 222 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 ATXN1LP0C7T5 689 aaKnown RBP7.04□□□□□ -1.28
PTCD2-201ENST00000308077 PRKCHP24723 683 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 NBL1P41271 181 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 CTSOP43234 321 aaPredicted RBP7.04□□□□□ -1.28
PTCD2-201ENST00000308077 CCR10P46092 362 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 NPY2RP49146 381 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 NUBP1P53384 320 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 GEMIN4P57678 1058 aaKnown RBP7.04□□□□□ -1.28
PTCD2-201ENST00000308077 MAGOHP61326 146 aaKnown RBP7.04□□□□□ -1.28
PTCD2-201ENST00000308077 MSLNQ13421 630 aaPredicted RBP7.04□□□□□ -1.28
PTCD2-201ENST00000308077 ADGRE1Q14246 886 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 DHCR24Q15392 516 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 CTC1Q2NKJ3 1217 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 INO80DQ53TQ3 878 aaPredicted RBP7.04□□□□□ -1.28
PTCD2-201ENST00000308077 PITRM1Q5JRX3 1037 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 BMP8AQ7Z5Y6 402 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 TDRPQ86YL5 185 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 BBS5Q8N3I7 341 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 SLC25A41Q8N5S1 370 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 DCAKDQ8WVC6 231 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 MRRFQ96E11 262 aaKnown RBP7.04□□□□□ -1.28
PTCD2-201ENST00000308077 ZFYVE19Q96K21 471 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 ZNF778Q96MU6 729 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 PAFAH2Q99487 392 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 CCDC77Q9BR77 488 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 C2orf49Q9BVC5 232 aaPredicted RBP7.04□□□□□ -1.28
PTCD2-201ENST00000308077 IL22Q9GZX6 179 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 TRPV4Q9HBA0 871 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 ARNT2Q9HBZ2 717 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 NOD2Q9HC29 1040 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 CHRAC1Q9NRG0 131 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 DUS2Q9NX74 493 aaKnown RBP7.04□□□□□ -1.28
PTCD2-201ENST00000308077 MOCS1Q9NZB8 636 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 GDE1Q9NZC3 331 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 IL1RAPL1Q9NZN1 696 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 SOX13Q9UN79 622 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 MTCH2Q9Y6C9 303 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 FBN3Q75N90 2809 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 KIAA1549LQ6ZVL6 1849 aa7.04□□□□□ -1.28
PTCD2-201ENST00000308077 ZCWPW2A0A1B0GU75 182 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 LOC285095A0A1B0GVY8 99 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 FAM159BA6NKW6 160 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 HEPACAM2A8MVW5 462 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SLC9A3R1O14745 358 aaPredicted RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 INSIG1O15503 277 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 UGT1A9O60656 530 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 CDH16O75309 829 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 ZNF821O75541 412 aaPredicted RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 ALDH1A2O94788 518 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 ARSAP15289 507 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 NMBRP28336 390 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 STX2P32856 288 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 LTBRP36941 435 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 STK19P49842 368 aaPredicted RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SERPINH1P50454 418 aaKnown RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SCNN1BP51168 640 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 POU6F1Q14863 301 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 TMED2Q15363 201 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SLC1A5Q15758 541 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SMAD1Q15797 465 aaKnown RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 KLHL38Q2WGJ6 581 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 ANKRD20A4Q4UJ75 823 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 SIRPB2Q5JXA9 342 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 ATXN7L2Q5T6C5 722 aaPredicted RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 TMEM215Q68D42 235 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 TANGO2Q6ICL3 276 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 MICALCLQ6ZW33 695 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 CROCCP2Q86T23 111 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 TMEM135Q86UB9 458 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 C12orf40Q86WS4 652 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 CCDC117Q8IWD4 279 aaPredicted RBP7.03□□□□□ -1.28
PTCD2-201ENST00000308077 NAT16Q8N8M0 369 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 BPIFB1Q8TDL5 484 aa7.03□□□□□ -1.28
PTCD2-201ENST00000308077 ATP2A3Q93084 1043 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms