RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ZYG11BQ9C0D3 744 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 SP110Q9HB58 689 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 STARD7Q9NQZ5 370 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 ZNF212Q9UDV6 495 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 ARL5AQ9Y689 179 aa11.89□□□□□ -0.51
RHO-201ENST00000296271 C5orf42Q9H799 3197 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 EOMESO95936 686 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 TFEBP19484 476 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 ITGAXP20702 1163 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 SLC6A4P31645 630 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 RAP1GDS1P52306 607 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 ZNF135P52742 658 aaPredicted RBP11.88□□□□□ -0.51
RHO-201ENST00000296271 ATXN3P54252 364 aaPredicted RBP11.88□□□□□ -0.51
RHO-201ENST00000296271 CDKN2DP55273 166 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 SLC12A1Q13621 1099 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 FRG1Q14331 258 aaKnown RBP11.88□□□□□ -0.51
RHO-201ENST00000296271 LRRC36Q1X8D7 754 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.88□□□□□ -0.51
RHO-201ENST00000296271 DEFB107AQ8IZN7 70 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 LZTR1Q8N653 840 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 C2CD4AQ8NCU7 369 aaPredicted RBP11.88□□□□□ -0.51
RHO-201ENST00000296271 ARRDC2Q8TBH0 407 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 UCMAQ8WVF2 138 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 SCG3Q8WXD2 468 aaKnown RBP11.88□□□□□ -0.51
RHO-201ENST00000296271 HDAC10Q969S8 669 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 PHF21BQ96EK2 531 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 CATSPER2Q96P56 530 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 CASD1Q96PB1 797 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 ENTPD7Q9NQZ7 604 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 SCN5AQ14524 2016 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 INPPL1O15357 1258 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 MAGEC1O60732 1142 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 GJB5O95377 273 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 BAG2O95816 211 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 SLC4A1P02730 911 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 ATF6P18850 670 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 OR1E1P30953 314 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 CDK7P50613 346 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 SGSHP51688 502 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 CCNG1P51959 295 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 KLF10Q13118 480 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 FBXO48Q5FWF7 155 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 MAP3K21Q5TCX8 1036 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 LIPMQ5VYY2 423 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 NXNQ6DKJ4 435 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 CNTN4Q8IWV2 1026 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 UMODL1-AS1Q8N2C9 162 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 RNF148Q8N7C7 305 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 TTC16Q8NEE8 873 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 OR7D4Q8NG98 312 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 WBP2Q969T9 261 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 C8orf48Q96LL4 319 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 TBATAQ96M53 351 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 SLC25A51Q9H1U9 297 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 CXorf56Q9H5V9 222 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 TCF7L2Q9NQB0 619 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 IGSF5Q9NSI5 407 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 SRRDQ9UH36 339 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 LRRC42Q9Y546 428 aa11.88□□□□□ -0.51
RHO-201ENST00000296271 MATN2O00339 956 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 AIM2O14862 343 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 SKIP12755 728 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 RHOQP17081 205 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 RGRP47804 291 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 CD151P48509 253 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 SERPINH1P50454 418 aaKnown RBP11.87□□□□□ -0.51
RHO-201ENST00000296271 COPAP53621 1224 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 RPS24P62847 133 aaKnown RBP11.87□□□□□ -0.51
RHO-201ENST00000296271 CDK18Q07002 472 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 SEMA3AQ14563 771 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 MSANTD2Q6P1R3 559 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 POTEHQ6S545 545 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 LRRC74BQ6ZQY2 392 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 ABI1Q8IZP0 508 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 OR13C4Q8NGS5 318 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 BLOC1S5Q8TDH9 187 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 NAT14Q8WUY8 206 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 STMN2Q93045 179 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 SEMA3CQ99985 751 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 DRC3Q9H069 523 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 ILKAPQ9H0C8 392 aaPredicted RBP11.87□□□□□ -0.51
RHO-201ENST00000296271 POMKQ9H5K3 350 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 GKN1Q9NS71 199 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 TMEM248Q9NWD8 314 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 CDY1Q9Y6F8 540 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 FNDC1Q4ZHG4 1894 aaPredicted RBP11.87□□□□□ -0.51
RHO-201ENST00000296271 TLR5O60602 858 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 INHAP05111 366 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 ATXN1LP0C7T5 689 aaKnown RBP11.87□□□□□ -0.51
RHO-201ENST00000296271 COX4I1P13073 169 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 SLC34A1Q06495 639 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 ZNF33AQ06730 810 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 HNRNPDQ14103 355 aaKnown RBP11.87□□□□□ -0.51
RHO-201ENST00000296271 MRPL58Q14197 206 aaKnown RBP11.87□□□□□ -0.51
RHO-201ENST00000296271 POLD3Q15054 466 aaPredicted RBP11.87□□□□□ -0.51
RHO-201ENST00000296271 NFE2Q16621 373 aaPredicted RBP11.87□□□□□ -0.51
RHO-201ENST00000296271 MUM1Q2TAK8 710 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 ANO7Q6IWH7 933 aa11.87□□□□□ -0.51
RHO-201ENST00000296271 TIGD7Q6NT04 549 aaPredicted RBP11.87□□□□□ -0.51
RHO-201ENST00000296271 LRRC8DQ7L1W4 858 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms