RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 USP50Q70EL3 339 aaPredicted RBP16.04■□□□□ 0.16
SMAD6-201ENST00000288840 ARPINQ7Z6K5 226 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 PIM3Q86V86 326 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 ZC3HC1Q86WB0 502 aaKnown RBP16.04■□□□□ 0.16
SMAD6-201ENST00000288840 PTGR2Q8N8N7 351 aaPredicted RBP16.04■□□□□ 0.16
SMAD6-201ENST00000288840 DNAJC1Q96KC8 554 aaKnown RBP16.04■□□□□ 0.16
SMAD6-201ENST00000288840 APOL5Q9BWW9 433 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 FBRSL1Q9HCM7 1045 aaKnown RBP16.04■□□□□ 0.16
SMAD6-201ENST00000288840 RCOR3Q9P2K3 495 aaPredicted RBP16.04■□□□□ 0.16
SMAD6-201ENST00000288840 THEGQ9P2T0 379 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 RGS17Q9UGC6 210 aaPredicted RBP16.04■□□□□ 0.16
SMAD6-201ENST00000288840 TRIP11Q15643 1979 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 PTGESO14684 152 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 INPP4BO15327 924 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 RAMP2O60895 175 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 SIX3O95343 332 aaPredicted RBP16.03■□□□□ 0.16
SMAD6-201ENST00000288840 GLP2RO95838 553 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 UQCRBP14927 111 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 RAP1GDS1P52306 607 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 POLD3Q15054 466 aaPredicted RBP16.03■□□□□ 0.16
SMAD6-201ENST00000288840 OTUD3Q5T2D3 398 aaPredicted RBP16.03■□□□□ 0.16
SMAD6-201ENST00000288840 DNAJC14Q6Y2X3 702 aaPredicted RBP16.03■□□□□ 0.16
SMAD6-201ENST00000288840 SETD3Q86TU7 594 aaPredicted RBP16.03■□□□□ 0.16
SMAD6-201ENST00000288840 DNAJC28Q9NX36 388 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 GJD2Q9UKL4 321 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 ADAM28Q9UKQ2 775 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 TIMM22Q9Y584 194 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 TRPV2Q9Y5S1 764 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 NRXN2Q9P2S2 1712 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 ZNFX1Q9P2E3 1918 aaKnown RBP16.03■□□□□ 0.16
SMAD6-201ENST00000288840 AP3B1O00203 1094 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 SNNO75324 88 aaPredicted RBP16.03■□□□□ 0.16
SMAD6-201ENST00000288840 OR6B1O95007 311 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 JUNP05412 331 aaKnown RBP16.03■□□□□ 0.16
SMAD6-201ENST00000288840 HLA-DQB2P05538 268 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 LINC00032P0C843 101 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 YWHAQP27348 245 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 GPR15P49685 360 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 SLC7A2P52569 658 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 ESRRGP62508 458 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 NAB1Q13506 487 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 MAPRE2Q15555 327 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 PPP1R3AQ16821 1122 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 MTX3Q5HYI7 312 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 TAF2Q6P1X5 1199 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 SMG8Q8ND04 991 aaKnown RBP16.03■□□□□ 0.16
SMAD6-201ENST00000288840 GTF3C2Q8WUA4 911 aaPredicted RBP16.03■□□□□ 0.16
SMAD6-201ENST00000288840 CASP10Q92851 521 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 PBXIP1Q96AQ6 731 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 HEATR9A2RTY3 570 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 TIPRLO75663 272 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 MYL4P12829 197 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 ATP5F1P24539 256 aaPredicted RBP16.03■□□□□ 0.16
SMAD6-201ENST00000288840 CD68P34810 354 aaPredicted RBP16.03■□□□□ 0.16
SMAD6-201ENST00000288840 PPIDQ08752 370 aaKnown RBP16.03■□□□□ 0.16
SMAD6-201ENST00000288840 PKDCCQ504Y2 493 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 CEP97Q8IW35 865 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 PSMG2Q969U7 264 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 RTP4Q96DX8 246 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 SIKE1Q9BRV8 207 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 ENTPD7Q9NQZ7 604 aa16.03■□□□□ 0.16
SMAD6-201ENST00000288840 GREB1LQ9C091 1923 aaPredicted RBP16.02■□□□□ 0.16
SMAD6-201ENST00000288840 SCN1AP35498 2009 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 J3KR12 359 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 CRABP2P29373 138 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 NIPAL4Q0D2K0 466 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 MFSD14CQ5VZR4 134 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 C16orf59Q7L2K0 433 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 CUZD1Q86UP6 607 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 NCLNQ969V3 563 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 SORT1Q99523 831 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 DCUN1D5Q9BTE7 237 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 C1orf50Q9BV19 199 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 MUC3BQ9H195 1237 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 RRAGCQ9HB90 399 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 OXSMQ9NWU1 459 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 CAPN14A8MX76 684 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 GUCA1CO95843 209 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 CES1P23141 567 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 RGS2P41220 211 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 CHN2P52757 468 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 DCLRE1AQ6PJP8 1040 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 RBM44Q6ZP01 1051 aaKnown RBP16.02■□□□□ 0.16
SMAD6-201ENST00000288840 TMEM86AQ8N2M4 240 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 CNTD1Q8N815 330 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 PCYOX1LQ8NBM8 494 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 C3orf58Q8NDZ4 430 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 VPS50Q96JG6 964 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 RTKNQ9BST9 563 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 NOL11Q9H8H0 719 aaKnown RBP16.02■□□□□ 0.16
SMAD6-201ENST00000288840 ABCC13Q9NSE7 274 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 CROTQ9UKG9 612 aa16.02■□□□□ 0.16
SMAD6-201ENST00000288840 GNEQ9Y223 722 aaKnown RBP16.02■□□□□ 0.16
SMAD6-201ENST00000288840 GSTA4O15217 222 aa16.02■□□□□ 0.15
SMAD6-201ENST00000288840 IL10P22301 178 aa16.02■□□□□ 0.15
SMAD6-201ENST00000288840 WARSP23381 471 aaKnown RBP16.02■□□□□ 0.15
SMAD6-201ENST00000288840 SLC10A7Q0GE19 358 aa16.02■□□□□ 0.15
SMAD6-201ENST00000288840 TIGD7Q6NT04 549 aaPredicted RBP16.02■□□□□ 0.15
SMAD6-201ENST00000288840 C14orf80Q86SX3 495 aa16.02■□□□□ 0.15
SMAD6-201ENST00000288840 ARHGAP18Q8N392 663 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms