RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 TPCN2Q8NHX9 752 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 CEP76Q8TAP6 659 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 KLF6Q99612 283 aaPredicted RBP9.29□□□□□ -0.92
HMGN1-201ENST00000288344 BAG1Q99933 345 aaPredicted RBP9.29□□□□□ -0.92
HMGN1-201ENST00000288344 ANP32EQ9BTT0 268 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 TM6SF2Q9BZW4 377 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 GOLPH3Q9H4A6 298 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 TM9SF3Q9HD45 589 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 FSCN3Q9NQT6 498 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 GPR27Q9NS67 375 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 DNAAF2Q9NVR5 837 aaKnown RBP9.29□□□□□ -0.92
HMGN1-201ENST00000288344 ZMIZ1Q9ULJ6 1067 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 HPCAL4Q9UM19 191 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 NCKAP1Q9Y2A7 1128 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 HYOU1Q9Y4L1 999 aa9.29□□□□□ -0.92
HMGN1-201ENST00000288344 ATXN2Q99700 1313 aaKnown RBP9.28□□□□□ -0.92
HMGN1-201ENST00000288344 A0A1B0GTW7 788 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 C16orf96A6NNT2 1141 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 BCAT2O15382 392 aaPredicted RBP9.28□□□□□ -0.92
HMGN1-201ENST00000288344 HTRA2O43464 458 aaPredicted RBP9.28□□□□□ -0.92
HMGN1-201ENST00000288344 KRT7P08729 469 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 ADRB3P13945 408 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 CD59P13987 128 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 DESP17661 470 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 ENGP17813 658 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 ITIH2P19823 946 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 CDKN2BP42772 138 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 SNRPD1P62314 119 aaKnown RBP9.28□□□□□ -0.92
HMGN1-201ENST00000288344 GBE1Q04446 702 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 SFSWAPQ12872 951 aaKnown RBP9.28□□□□□ -0.92
HMGN1-201ENST00000288344 ELOAQ14241 798 aaKnown RBP9.28□□□□□ -0.92
HMGN1-201ENST00000288344 SHBQ15464 509 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 WDR45BQ5MNZ6 344 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 SYCP2LQ5T4T6 812 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 TMCO3Q6UWJ1 677 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 MFSD7Q6UXD7 560 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 PARS2Q7L3T8 475 aaKnown RBP9.28□□□□□ -0.92
HMGN1-201ENST00000288344 ACRBPQ8NEB7 543 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 OR6K2Q8NGY2 324 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 OR14C36Q8NHC7 312 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 NETO1Q8TDF5 533 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 ASB12Q8WXK4 309 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 BMFQ96LC9 184 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 OLFM3Q96PB7 478 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 OMDQ99983 421 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 MGME1Q9BQP7 344 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 HERPUD2Q9BSE4 406 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 C1QTNF2Q9BXJ5 285 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 PREBQ9HCU5 417 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 DTLQ9NZJ0 730 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 UBA2Q9UBT2 640 aaPredicted RBP9.28□□□□□ -0.92
HMGN1-201ENST00000288344 BPTFQ12830 3046 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 FRYQ5TBA9 3013 aa9.28□□□□□ -0.92
HMGN1-201ENST00000288344 SHROOM3Q8TF72 1996 aa9.27□□□□□ -0.92
HMGN1-201ENST00000288344 FREM2Q5SZK8 3169 aa9.27□□□□□ -0.92
HMGN1-201ENST00000288344 ANKRD36A6QL64 1941 aa9.27□□□□□ -0.92
HMGN1-201ENST00000288344 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-201ENST00000288344 GRID2IPA4D2P6 1211 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 LRRC72A6NJI9 287 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 C1QTNF3-AMACRE9PGA6 284 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 VILLO15195 856 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 MFSD11O43934 449 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 FZD6O60353 706 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 GM2AP17900 193 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 CCNCP24863 283 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 CYLC1P35663 651 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-201ENST00000288344 ARL4AP40617 200 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 GARSP41250 739 aaKnown RBP9.27□□□□□ -0.93
HMGN1-201ENST00000288344 CTSKP43235 329 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 GRIA4P48058 902 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 MARCKSL1P49006 195 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 VAV2P52735 878 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 RACK1P63244 317 aaKnown RBP9.27□□□□□ -0.93
HMGN1-201ENST00000288344 HNRNPDQ14103 355 aaKnown RBP9.27□□□□□ -0.93
HMGN1-201ENST00000288344 PUM1Q14671 1186 aaKnown RBP eCLIP9.27□□□□□ -0.933e-25■□□□□ 8.5
HMGN1-201ENST00000288344 POM121L1PQ3SYA9 428 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 LINC01559Q495D7 138 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 C11orf63Q6NUN7 778 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 GDPD4Q6W3E5 623 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 ZNF662Q6ZS27 426 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 SRLQ86TD4 932 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 KATNAL2Q8IYT4 538 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 CNTD1Q8N815 330 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 ZNF511Q8NB15 262 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 PLPP7Q8NBV4 271 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 KCTD6Q8NC69 237 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 ARRDC2Q8TBH0 407 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 KRT35Q92764 455 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 FUBP1Q96AE4 644 aaKnown RBP9.27□□□□□ -0.93
HMGN1-201ENST00000288344 TADA1Q96BN2 335 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 CENPTQ96BT3 561 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 ZNF641Q96N77 438 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-201ENST00000288344 KLHL32Q96NJ5 620 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 LENG8Q96PV6 779 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-201ENST00000288344 OSBPL1AQ9BXW6 950 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 SUV39H2Q9H5I1 410 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 KLHL11Q9NVR0 708 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 TPX2Q9ULW0 747 aaKnown RBP9.27□□□□□ -0.93
HMGN1-201ENST00000288344 PPIL1Q9Y3C6 166 aa9.27□□□□□ -0.93
HMGN1-201ENST00000288344 PCDHA3Q9Y5H8 950 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms