RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SLC25A52Q3SY17 297 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 PDZK1Q5T2W1 519 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 ARCQ7LC44 396 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 LDB1Q86U70 411 aaPredicted RBP12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 ENKURQ8TC29 256 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 NAT14Q8WUY8 206 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 ASIC4Q96FT7 647 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 NARS2Q96I59 477 aaKnown RBP12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 PCDH12Q9NPG4 1184 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 RBPJLQ9UBG7 517 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 FAM50BQ9Y247 325 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 HS6ST1O60243 411 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 CCNB1P14635 433 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 TTKP33981 857 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 GRIA3P42263 894 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 POU4F1Q01851 419 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 LDLRAP1Q5SW96 308 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 C15orf39Q6ZRI6 1047 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 KLHL5Q96PQ7 755 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 NUAK2Q9H093 628 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 XYLT2Q9H1B5 865 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 MORF4L1Q9UBU8 362 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 CNTRLQ7Z7A1 2325 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 ANKRD36CQ5JPF3 1778 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 ZNF197O14709 1029 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 ONECUT3O60422 494 aaPredicted RBP12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 MT-CYBP00156 380 aaPredicted RBP12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 FCGR1AP12314 374 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 ITGB6P18564 788 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 NPY2RP49146 381 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 PGGT1BP53609 377 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 FBXO48Q5FWF7 155 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 SYPL2Q5VXT5 272 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 SCIMPQ6UWF3 145 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 DNAJC14Q6Y2X3 702 aaPredicted RBP12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 CAMK1DQ8IU85 385 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 FAM47BQ8NA70 645 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 NPAS2Q99743 824 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 C6orf203Q9P0P8 240 aaPredicted RBP12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 RNF112Q9ULX5 631 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 C5orf58C9J3I9 102 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 PLIN3O60664 434 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 ZNF781Q8N8C0 355 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 NIPA2Q8N8Q9 360 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 FAM156AQ8NDB6 213 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 CLEC4MQ9H2X3 399 aaPredicted RBP12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 TRHDEQ9UKU6 1024 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 SLC30A1Q9Y6M5 507 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 TBKBP1A7MCY6 615 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 CLASP2O75122 1294 aaKnown RBP12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 FAM228AQ86W67 206 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 UXS1Q8NBZ7 420 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 BPIFB6Q8NFQ5 453 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 OR52K2Q8NGK3 314 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 ELMO1Q92556 727 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 FIG4Q92562 907 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 HTRA1Q92743 480 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 MOCOSQ96EN8 888 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 ZNF333Q96JL9 665 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 DUSP16Q9BY84 665 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 IL22Q9GZX6 179 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 MID1IP1Q9NPA3 183 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 MAGEB16A2A368 324 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 TRIM43BA6NCK2 446 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 C9JVG2 144 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 SLCO1B7G3V0H7 640 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 TYROBPO43914 113 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 FAM20BO75063 409 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 ZBTB11O95625 1053 aaPredicted RBP12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 CCNA2P20248 432 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 SLC39A12Q504Y0 691 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 TTC30BQ8N4P2 665 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 KCTD14Q9BQ13 255 aaPredicted RBP12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 C9orf16Q9BUW7 83 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 SPRTNQ9H040 489 aaPredicted RBP12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 RGS18Q9NS28 235 aa12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 DNAAF2Q9NVR5 837 aaKnown RBP12.65□□□□□ -0.38
SLC6A1-201ENST00000287766 TFECO14948 347 aaPredicted RBP12.65□□□□□ -0.39
SLC6A1-201ENST00000287766 HDAC3O15379 428 aa12.65□□□□□ -0.39
SLC6A1-201ENST00000287766 L1CAMP32004 1257 aa12.65□□□□□ -0.39
SLC6A1-201ENST00000287766 CDK7P50613 346 aa12.65□□□□□ -0.39
SLC6A1-201ENST00000287766 TCEAL1Q15170 157 aa12.65□□□□□ -0.39
SLC6A1-201ENST00000287766 C6orf183Q5T699 404 aa12.65□□□□□ -0.39
SLC6A1-201ENST00000287766 MRNIPQ6NTE8 343 aa12.65□□□□□ -0.39
SLC6A1-201ENST00000287766 SLC26A9Q7LBE3 791 aa12.65□□□□□ -0.39
SLC6A1-201ENST00000287766 SLC44A2Q8IWA5 706 aaPredicted RBP12.65□□□□□ -0.39
SLC6A1-201ENST00000287766 BORCS5Q969J3 196 aa12.65□□□□□ -0.39
SLC6A1-201ENST00000287766 LENG8Q96PV6 779 aaPredicted RBP12.65□□□□□ -0.39
SLC6A1-201ENST00000287766 GBA2Q9HCG7 927 aaPredicted RBP12.65□□□□□ -0.39
SLC6A1-201ENST00000287766 RPRD1BQ9NQG5 326 aaKnown RBP12.65□□□□□ -0.39
SLC6A1-201ENST00000287766 TEX264Q9Y6I9 313 aa12.65□□□□□ -0.39
SLC6A1-201ENST00000287766 PNMA8CA0A1B0GUJ8 204 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 BIRC5O15392 142 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 TM7SF2O76062 418 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 OR4Q2P0C623 313 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 DBTP11182 482 aaKnown RBP12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 CD86P42081 329 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 PPIL2Q13356 520 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 TP53BP2Q13625 1128 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms