RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 TPP1O14773 563 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 RFPL1O75677 317 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 ARSDP51689 593 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 YBEYP58557 167 aaPredicted RBP11.1□□□□□ -0.63
GGPS1-201ENST00000282841 CREMQ03060 361 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 SETDB1Q15047 1291 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 ZNF789Q5FWF6 425 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 TTC39BQ5VTQ0 682 aaPredicted RBP11.1□□□□□ -0.63
GGPS1-201ENST00000282841 STEAP4Q687X5 459 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 PTAR1Q7Z6K3 402 aaPredicted RBP11.1□□□□□ -0.63
GGPS1-201ENST00000282841 NDUFAF2Q8N183 169 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 VN1R2Q8NFZ6 395 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 ZNF473Q8WTR7 871 aaKnown RBP11.1□□□□□ -0.63
GGPS1-201ENST00000282841 SORCS1Q8WY21 1168 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 TTC17Q96AE7 1141 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 POLR1EQ9GZS1 481 aaKnown RBP11.1□□□□□ -0.63
GGPS1-201ENST00000282841 IL22Q9GZX6 179 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 MAGEH1Q9H213 219 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 TLE6Q9H808 572 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 VPS51Q9UID3 782 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 MTO1Q9Y2Z2 717 aaKnown RBP11.1□□□□□ -0.63
GGPS1-201ENST00000282841 FAM169AQ9Y6X4 670 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 MIA3Q5JRA6 1907 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 IQANK1A0A1B0GTG1 560 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 ANTXRLA6NF34 631 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 TMCC1O94876 653 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 LUC7L3O95232 432 aaKnown RBP11.09□□□□□ -0.63
GGPS1-201ENST00000282841 ALDOAP04075 364 aaKnown RBP11.09□□□□□ -0.63
GGPS1-201ENST00000282841 SNRPAP09012 282 aaKnown RBP11.09□□□□□ -0.63
GGPS1-201ENST00000282841 PTPN2P17706 415 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 ARNTP27540 789 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 GBP2P32456 591 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-201ENST00000282841 PDE1BQ01064 536 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 TEDDM1Q5T9Z0 273 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 ASTLQ6HA08 431 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-201ENST00000282841 ARID3BQ8IVW6 561 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-201ENST00000282841 BANPQ8N9N5 519 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 GIMAP7Q8NHV1 300 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 RMDN1Q96DB5 314 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 MOCOSQ96EN8 888 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 IFT43Q96FT9 208 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 CEP295NLQ96MC4 621 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 TGS1Q96RS0 853 aaKnown RBP11.09□□□□□ -0.63
GGPS1-201ENST00000282841 ELAC2Q9BQ52 826 aaKnown RBP11.09□□□□□ -0.63
GGPS1-201ENST00000282841 MTIF3Q9H2K0 278 aaKnown RBP11.09□□□□□ -0.63
GGPS1-201ENST00000282841 ZNF395Q9H8N7 513 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-201ENST00000282841 ABCB8Q9NUT2 735 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 TXNDC16Q9P2K2 825 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 LSM7Q9UK45 103 aaKnown RBP11.09□□□□□ -0.63
GGPS1-201ENST00000282841 TBC1D30Q9Y2I9 924 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 ASB3Q9Y575 518 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 KDELR3O43731 214 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 SPAG6O75602 509 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 ALDH1A2O94788 518 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 CDC25CP30307 473 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 PPP3CCP48454 512 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 ZNF33AQ06730 810 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 MGAT5Q09328 741 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 LMAN2Q12907 356 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 C5orf22Q49AR2 442 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 LRRC73Q5JTD7 316 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 HHATQ5VTY9 493 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 PKN3Q6P5Z2 889 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 GET4Q7L5D6 327 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-201ENST00000282841 RIBC1Q8N443 379 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-201ENST00000282841 ZNF276Q8N554 614 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 TEX26Q8N6G2 289 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 EFHBQ8N7U6 833 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 OR13C4Q8NGS5 318 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 OR6P1Q8NGX9 317 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 PTPRN2Q92932 1015 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 MIEF2Q96C03 454 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 INTS6Q9UL03 887 aaKnown RBP11.09□□□□□ -0.63
GGPS1-201ENST00000282841 SOX13Q9UN79 622 aa11.09□□□□□ -0.63
GGPS1-201ENST00000282841 ILVBLA1L0T0 632 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 ERI2A8K979 691 aaKnown RBP11.08□□□□□ -0.64
GGPS1-201ENST00000282841 GPR39O43194 453 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 KRT37O76014 449 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 ITGA2BP08514 1039 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 ATXN1LP0C7T5 689 aaKnown RBP11.08□□□□□ -0.64
GGPS1-201ENST00000282841 GABRB3P28472 473 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 NPY2RP49146 381 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 IRF9Q00978 393 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 SEPT7Q16181 437 aaKnown RBP11.08□□□□□ -0.64
GGPS1-201ENST00000282841 PPP2R2DQ66LE6 453 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 LINC00523Q86TU6 105 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 RYBPQ8N488 228 aaPredicted RBP11.08□□□□□ -0.64
GGPS1-201ENST00000282841 PAF1Q8N7H5 531 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 ARMC2Q8NEN0 867 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 LPCAT1Q8NF37 534 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 DENND1AQ8TEH3 1009 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 ZNF707Q96C28 371 aaPredicted RBP11.08□□□□□ -0.64
GGPS1-201ENST00000282841 CHMP6Q96FZ7 201 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 ZNF317Q96PQ6 595 aaPredicted RBP11.08□□□□□ -0.64
GGPS1-201ENST00000282841 VPS11Q9H270 941 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 MTG2Q9H4K7 406 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 BPIFA1Q9NP55 256 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 ZDHHC4Q9NPG8 344 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 TDP1Q9NUW8 608 aa11.08□□□□□ -0.64
GGPS1-201ENST00000282841 MYO15AQ9UKN7 3530 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms