RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 SERPINA3P01011 423 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 CLEC17AQ6ZS10 378 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 TTC29Q8NA56 475 aaPredicted RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 RIT1Q92963 219 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 MRPL57Q9BQC6 102 aaKnown RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 PLAGL2Q9UPG8 496 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 NAALADL1Q9UQQ1 740 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 TRIM17Q9Y577 477 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 AK5Q9Y6K8 562 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 TMEM94Q12767 1356 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 CASKO14936 926 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 TFRCP02786 760 aaKnown RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 LTA4HP09960 611 aaKnown RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 PSME3P61289 254 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 ANXA8L1Q5VT79 327 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 GALNT7Q86SF2 657 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 C12orf56Q8IXR9 622 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 KAT5Q92993 513 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 RNF31Q96EP0 1072 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 MAP3K14Q99558 947 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 MTG1Q9BT17 334 aaPredicted RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 MUC13Q9H3R2 512 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 NPHP4O75161 1426 aaPredicted RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 DNASE1L1P49184 302 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 MPPE1Q53F39 396 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 SPESP1Q6UW49 350 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 SAPCD2Q86UD0 394 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 CLIP3Q96DZ5 547 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 RHBGQ9H310 441 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 BARX2Q9UMQ3 279 aaPredicted RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 H3BNX3 289 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 SLC9A3R1O14745 358 aaPredicted RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 SPTLC1O15269 473 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 UGT2B11O75310 529 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 NR4A1P22736 598 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 POLNQ7Z5Q5 900 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 ZNF75CPQ92670 426 aaPredicted RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 MGME1Q9BQP7 344 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 GORASP1Q9BQQ3 440 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 TRPV5Q9NQA5 729 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 ZNF639Q9UID6 485 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 SQORQ9Y6N5 450 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 FOXN3O00409 490 aaPredicted RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 PTPN5P54829 565 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 POU5F1Q01860 360 aaKnown RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 RNF19BQ6ZMZ0 732 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 PRR23BQ6ZRT6 265 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 GALNTL5Q7Z4T8 443 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 TMC3Q7Z5M5 1100 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 ZNF554Q86TJ5 538 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 SLCO6A1Q86UG4 719 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 MCEMP1Q8IX19 187 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 EFCAB3Q8N7B9 438 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 PCSK9Q8NBP7 692 aaKnown RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 STAG3L4Q8TBR4 150 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 C11orf24Q96F05 449 aaPredicted RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 PTPRHQ9HD43 1115 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 KLQ9UEF7 1012 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 ABHD14A-ACY1A0A1B0GW23 586 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 RIPK2O43353 540 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 CCNE2O96020 404 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 CSF1RP07333 972 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 ZNF157P51786 506 aaPredicted RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 XIAPP98170 497 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 OVOS1Q6IE37 1185 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 FBXL19Q6PCT2 694 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 PTCHD4Q6ZW05 846 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 C16orf86Q6ZW13 317 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 TCF12Q99081 682 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 ZNF780BQ9Y6R6 833 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 ATXN1P54253 815 aaKnown RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 SPDYCQ5MJ68 293 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 LRRC70Q7Z2Q7 622 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 SLITRK4Q8IW52 837 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 INO80EQ8NBZ0 244 aaPredicted RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 MCFD2Q8NI22 146 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 PIGKQ92643 395 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 XPNPEP3Q9NQH7 507 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 NUP50Q9UKX7 468 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 CAMTA2O94983 1202 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 MAP3K6O95382 1288 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 ICAM1P05362 532 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 CREMQ03060 361 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.79□□□□□ -1
NIPBL-201ENST00000282516 TFAP2DQ7Z6R9 452 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 RXFP2Q8WXD0 754 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 CELF6Q96J87 481 aaKnown RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 MRPL9Q9BYD2 267 aaKnown RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 SP140LQ9H930 580 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 OAS3Q9Y6K5 1087 aaKnown RBP8.79□□□□□ -1
NIPBL-201ENST00000282516 PXDNLA1KZ92 1463 aa8.79□□□□□ -1
NIPBL-201ENST00000282516 SGPL1O95470 568 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 PTDSS1P48651 473 aaKnown RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 ALDH5A1P51649 535 aaPredicted RBP8.78□□□□□ -1
NIPBL-201ENST00000282516 ORC1Q13415 861 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ACAP2Q15057 778 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 ZCCHC12Q6PEW1 402 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 AFTPHQ6ULP2 937 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 PDPRQ8NCN5 879 aa8.78□□□□□ -1
NIPBL-201ENST00000282516 CXorf40AQ8TE69 158 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms