RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 ZNF599Q96NL3 588 aa13.76□□□□□ -0.21
CT55-201ENST00000276241 PANX2Q96RD6 677 aa13.76□□□□□ -0.21
CT55-201ENST00000276241 CPEB1Q9BZB8 566 aaKnown RBP13.76□□□□□ -0.21
CT55-201ENST00000276241 SEPT3Q9UH03 358 aa13.76□□□□□ -0.21
CT55-201ENST00000276241 TTC24A2A3L6 582 aaPredicted RBP13.75□□□□□ -0.21
CT55-201ENST00000276241 IGLON5A6NGN9 336 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 UPK3BL1B0FP48 263 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 UPK3BL2E5RIL1 263 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 TSPAN6O43657 245 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 BUB1BO60566 1050 aaPredicted RBP13.75□□□□□ -0.21
CT55-201ENST00000276241 MAFKO60675 156 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 PRKCGP05129 697 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 ZNF883P0CG24 379 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 THEGLP0DJG4 465 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 SERPINA4P29622 427 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 RENBPP51606 427 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 SIM1P81133 766 aaPredicted RBP13.75□□□□□ -0.21
CT55-201ENST00000276241 BCL2L1Q07817 233 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 FGL2Q14314 439 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 ZNF423Q2M1K9 1284 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 ODF2Q5BJF6 829 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 GCNT7Q6ZNI0 430 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 PTAR1Q7Z6K3 402 aaPredicted RBP13.75□□□□□ -0.21
CT55-201ENST00000276241 BBS5Q8N3I7 341 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 MFSD2AQ8NA29 543 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 SPC24Q8NBT2 197 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 TMEM145Q8NBT3 493 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 LRRN4Q8WUT4 740 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 TUBGCP5Q96RT8 1024 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 ELF4Q99607 663 aaPredicted RBP13.75□□□□□ -0.21
CT55-201ENST00000276241 WRAP53Q9BUR4 548 aaKnown RBP13.75□□□□□ -0.21
CT55-201ENST00000276241 SLC17A9Q9BYT1 436 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 GOLPH3Q9H4A6 298 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 SUV39H2Q9H5I1 410 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 ATP13A3Q9H7F0 1226 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 DKK3Q9UBP4 350 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 BTBD3Q9Y2F9 522 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 PCDHB9Q9Y5E1 797 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 PCDHA13Q9Y5I0 950 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 CEP250Q9BV73 2442 aa13.75□□□□□ -0.21
CT55-201ENST00000276241 RAD51BO15315 384 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 FLRT2O43155 660 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 IPO7O95373 1038 aaKnown RBP13.74□□□□□ -0.21
CT55-201ENST00000276241 PEX11BO96011 259 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 PAK4O96013 591 aaPredicted RBP13.74□□□□□ -0.21
CT55-201ENST00000276241 TIMP2P16035 220 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 COMTP21964 271 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 KDELR1P24390 212 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 MMP13P45452 471 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 MAXP61244 160 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 FAM193AP78312 1265 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 SEMG2Q02383 582 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 FOXC1Q12948 553 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 SGCGQ13326 291 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 PAFAH1B3Q15102 231 aaKnown RBP13.74□□□□□ -0.21
CT55-201ENST00000276241 ZSWIM9Q86XI8 627 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 SPATS2Q86XZ4 545 aaKnown RBP13.74□□□□□ -0.21
CT55-201ENST00000276241 GATAD2AQ86YP4 633 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 PGBD5Q8N414 524 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 PQLC3Q8N755 202 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 OR13H1Q8NG92 308 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.74□□□□□ -0.21
CT55-201ENST00000276241 KLHDC7BQ96G42 594 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 ZNF641Q96N77 438 aaPredicted RBP13.74□□□□□ -0.21
CT55-201ENST00000276241 PSKH2Q96QS6 385 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 LUC7LQ9NQ29 371 aaKnown RBP13.74□□□□□ -0.21
CT55-201ENST00000276241 SCUBE2Q9NQ36 999 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 TTLL3Q9Y4R7 772 aa13.74□□□□□ -0.21
CT55-201ENST00000276241 A0A1B0GTQ1 180 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 TSPAN11A1L157 253 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 A6NNZ2 444 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 AREL1O15033 823 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 MAGEC1O60732 1142 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 MMP20O60882 483 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 NDUFA10O95299 355 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 LCA5LO95447 670 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 GARSP41250 739 aaKnown RBP13.73□□□□□ -0.21
CT55-201ENST00000276241 SLC1A1P43005 524 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 CSNK1DP48730 415 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 ARRB1P49407 418 aaPredicted RBP13.73□□□□□ -0.21
CT55-201ENST00000276241 AP1S1P61966 158 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 GBE1Q04446 702 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 ELP6Q0PNE2 266 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 GALNT2Q10471 571 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 SUZ12Q15022 739 aaKnown RBP13.73□□□□□ -0.21
CT55-201ENST00000276241 UGP2Q16851 508 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 MARC1Q5VT66 337 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 ERAP2Q6P179 960 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 BRAT1Q6PJG6 821 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 KDM7AQ6ZMT4 941 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 IQCHQ86VS3 1027 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 TMTC1Q8IUR5 882 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 RHOT1Q8IXI2 618 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.73□□□□□ -0.21
CT55-201ENST00000276241 RHBDD1Q8TEB9 315 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 PDCD6IPQ8WUM4 868 aaKnown RBP13.73□□□□□ -0.21
CT55-201ENST00000276241 RNF25Q96BH1 459 aaPredicted RBP13.73□□□□□ -0.21
CT55-201ENST00000276241 FAF2Q96CS3 445 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 NT5MQ9NPB1 228 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 PCDH12Q9NPG4 1184 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms