RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 AP4S1Q9Y587 144 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 PCDHGA7Q9Y5G6 932 aa16.96■□□□□ 0.31
SQLE-201ENST00000265896 ARHGEF37A1IGU5 675 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 ACOT8O14734 319 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 STAU1O95793 577 aaKnown RBP16.95■□□□□ 0.3
SQLE-201ENST00000265896 SLC7A2P52569 658 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 PLOD1Q02809 727 aaPredicted RBP16.95■□□□□ 0.3
SQLE-201ENST00000265896 SNX17Q15036 470 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 HERC6Q8IVU3 1022 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 MARVELD2Q8N4S9 558 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 C3orf30Q96M34 536 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 FAM96AQ9H5X1 160 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 RBM22Q9NW64 420 aaKnown RBP eCLIP16.95■□□□□ 0.3
SQLE-201ENST00000265896 MIOSQ9NXC5 875 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 ANKRD33BA6NCL7 494 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 CABYRO75952 493 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 PRSS56P0CW18 603 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 PSMC3P17980 439 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 ECT2LQ008S8 904 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 KRT80Q6KB66 452 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 ALKAL1Q6UXT8 129 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 IFNLR1Q8IU57 520 aaPredicted RBP16.95■□□□□ 0.3
SQLE-201ENST00000265896 GPR78Q96P69 363 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 TDRKHQ9Y2W6 561 aaKnown RBP16.95■□□□□ 0.3
SQLE-201ENST00000265896 PFDN1O60925 122 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 STT3AP46977 705 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 APLP1P51693 650 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 FAM83EQ2M2I3 478 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 KIF19Q2TAC6 998 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 GPR158Q5T848 1215 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 TMEM102Q8N9M5 508 aaPredicted RBP16.95■□□□□ 0.3
SQLE-201ENST00000265896 SMG8Q8ND04 991 aaKnown RBP16.95■□□□□ 0.3
SQLE-201ENST00000265896 GPR152Q8TDT2 470 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 NUDT8Q8WV74 236 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 CANT1Q8WVQ1 401 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 ZNF560Q96MR9 790 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 TBL1YQ9BQ87 522 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 NCKIPSDQ9NZQ3 722 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 ADAM28Q9UKQ2 775 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 NRCAMQ92823 1304 aa16.95■□□□□ 0.3
SQLE-201ENST00000265896 TADA2AO75478 443 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 POMCP01189 267 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 ATP5BP06576 529 aaKnown RBP16.94■□□□□ 0.3
SQLE-201ENST00000265896 OR4Q2P0C623 313 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 BRCC3P46736 316 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 ANKRD13AQ8IZ07 590 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 ATPAF2Q8N5M1 289 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 NAT16Q8N8M0 369 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 ESAMQ96AP7 390 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 PABPC5Q96DU9 382 aaKnown RBP16.94■□□□□ 0.3
SQLE-201ENST00000265896 BTBD9Q96Q07 612 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 Q9H521 79 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 BTRCQ9Y297 605 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 TRIP12Q14669 1992 aaPredicted RBP16.94■□□□□ 0.3
SQLE-201ENST00000265896 PSMD12O00232 456 aaPredicted RBP16.94■□□□□ 0.3
SQLE-201ENST00000265896 NR5A2O00482 541 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 UBFD1O14562 309 aaKnown RBP16.94■□□□□ 0.3
SQLE-201ENST00000265896 UBDO15205 165 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 BCAS2O75934 225 aaPredicted RBP16.94■□□□□ 0.3
SQLE-201ENST00000265896 HLA-DQB2P05538 268 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 SV2CQ496J9 727 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 VPS26BQ4G0F5 336 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 METTL21CQ5VZV1 264 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 REP15Q6BDI9 236 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 PKN3Q6P5Z2 889 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 B3GNT6Q6ZMB0 384 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 PDZD4Q76G19 769 aaPredicted RBP16.94■□□□□ 0.3
SQLE-201ENST00000265896 OFCC1Q8IZS5 231 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 FAM47BQ8NA70 645 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 SPPL2BQ8TCT7 592 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 NCSTNQ92542 709 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 NT5C3BQ969T7 300 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 SLCO4A1Q96BD0 722 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 HSPBAP1Q96EW2 488 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 SLC39A8Q9C0K1 460 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 FBXO5Q9UKT4 447 aa16.94■□□□□ 0.3
SQLE-201ENST00000265896 TSPAN3O60637 253 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 TNFAIP8O95379 198 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 CD4P01730 458 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 YAP1P46937 504 aaKnown RBP16.93■□□□□ 0.3
SQLE-201ENST00000265896 TBC1D25Q3MII6 688 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 FUT11Q495W5 492 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 UBXN11Q5T124 520 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 BTBD8Q5XKL5 378 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 NAPEPLDQ6IQ20 393 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 FAM43BQ6ZT52 329 aaPredicted RBP16.93■□□□□ 0.3
SQLE-201ENST00000265896 CUZD1Q86UP6 607 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 SPPL2CQ8IUH8 684 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 GPRC5AQ8NFJ5 357 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 ERLEC1Q96DZ1 483 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 MROH8Q9H579 483 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 ARHGEF38Q9NXL2 777 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 CACNA2D2Q9NY47 1150 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 GTF2IRD1Q9UHL9 959 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 EVLQ9UI08 416 aaPredicted RBP16.93■□□□□ 0.3
SQLE-201ENST00000265896 PRPF19Q9UMS4 504 aaKnown RBP16.93■□□□□ 0.3
SQLE-201ENST00000265896 SOCS2O14508 198 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 MYL3P08590 195 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 TFPTP0C1Z6 253 aa16.93■□□□□ 0.3
SQLE-201ENST00000265896 CPB1P15086 417 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms