RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 ABHD16BQ9H3Z7 469 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 PGM3O95394 542 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 COX4I1P13073 169 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 EPORP19235 508 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 SRP54P61011 504 aaKnown RBP17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 FBXW8Q8N3Y1 598 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 FAIM2Q9BWQ8 316 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 LRRC19Q9H756 370 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 SEMA4BQ9NPR2 832 aaPredicted RBP17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 DNMT3LQ9UJW3 386 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 SPATA31A5Q5VU36 1347 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 SPATA31A7Q8IWB4 1347 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 CHURC1-FNTBB4DL54 471 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 AP3D1O14617 1153 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 TRUB2O95900 331 aaKnown RBP17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 CATP04040 527 aaKnown RBP17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 HSF2Q03933 536 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 QPRTQ15274 297 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 ARHGAP36Q6ZRI8 547 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 TMEM134Q9H6X4 195 aa17.6■□□□□ 0.41
NOTCH3-201ENST00000263388 DHRS12A0PJE2 317 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 IRGMA1A4Y4 181 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 AFTPHQ6ULP2 937 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 ADAMTSL2Q86TH1 951 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 MAP4K3Q8IVH8 894 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 SLC35C1Q96A29 364 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 COMMD3-BMI1R4GMX3 469 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 AGLP35573 1532 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 NUP205Q92621 2012 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 G3V2T6 193 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 CHRNGP07510 517 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 BDNFP23560 247 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 RAB25P57735 213 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 PTGES3Q15185 160 aaKnown RBP17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 RFX4Q33E94 735 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 FNDC3BQ53EP0 1204 aaKnown RBP17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 PYDC2Q56P42 97 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 OLFML2AQ68BL7 652 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 FBXL19Q6PCT2 694 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 RPTNQ6XPR3 784 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 MARK2Q7KZI7 788 aaKnown RBP17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 DEFB106AQ8N104 65 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 IL17RBQ9NRM6 502 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 LIASO43766 372 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 ATP5C1P36542 298 aaKnown RBP17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 ULK3Q6PHR2 472 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 CXXC5Q7LFL8 322 aaKnown RBP17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 CLCC1Q96S66 551 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 TRIT1Q9H3H1 467 aaKnown RBP17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 COG5Q9UP83 839 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 HAT1O14929 419 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 USP46P62068 366 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 TRIM40Q6P9F5 258 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 C3orf67Q6ZVT6 689 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 EPS8L1Q8TE68 723 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 CMTM6Q9NX76 183 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 MFHAS1Q9Y4C4 1052 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 TEX46H3BTG2 121 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 SLC28A1O00337 649 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 NAGLUP54802 743 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 TTMPQ5BVD1 217 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 NANOGNBQ7Z5D8 188 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 SOCS4Q8WXH5 440 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 ZNF607Q96SK3 696 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 C2CD2Q9Y426 696 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 CSDE1O75534 798 aaKnown RBP17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 RECQL4O94761 1208 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 ZNF540Q8NDQ6 660 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 PLEKHG4BQ96PX9 1271 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 ULK1O75385 1050 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 SLC6A2P23975 617 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 MYL9P24844 172 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 DNAAF5Q86Y56 855 aa17.59■□□□□ 0.41
NOTCH3-201ENST00000263388 SOX10P56693 466 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 OLFML1Q6UWY5 402 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 SLC30A10Q6XR72 485 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 PEX5LQ8IYB4 626 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 SFRP1Q8N474 314 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 LRRC17Q8N6Y2 441 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 TSEN2Q8NCE0 465 aaKnown RBP17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 LENG1Q96BZ8 264 aaPredicted RBP17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 SLC9A8Q9Y2E8 581 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 ZNF638Q14966 1978 aaKnown RBP17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 MAP2K7O14733 419 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 ACSL4O60488 711 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 MAPK9P45984 424 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 EEF1AKMT1Q8WVE0 214 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 OXCT2Q9BYC2 517 aaPredicted RBP17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 MCUBQ9NWR8 336 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 SSR3Q9UNL2 185 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 MON2Q7Z3U7 1717 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 TECPR2O15040 1411 aa17.58■□□□□ 0.41
NOTCH3-201ENST00000263388 ANPEPP15144 967 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 XIAPP98170 497 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 POLNQ7Z5Q5 900 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 SLC16A10Q8TF71 515 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 FBXO10Q9UK96 956 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 SLC25A12O75746 678 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 UGT2B15P54855 530 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms