RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 FGL2Q14314 439 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 GRM3Q14832 879 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 STX1AQ16623 288 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 KLHL40Q2TBA0 621 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 PARP15Q460N3 678 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 TAF1BQ53T94 588 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-202ENST00000262396 C3orf38Q5JPI3 329 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 CDKAL1Q5VV42 579 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 PPP1R2P3Q6NXS1 205 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 CRTC1Q6UUV9 634 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 GPR155Q7Z3F1 870 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 RD3Q7Z3Z2 195 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 BNIPLQ7Z465 357 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 NLRP14Q86W24 1093 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 PHACTR4Q8IZ21 702 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 PYROXD2Q8N2H3 581 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 FAM181AQ8N9Y4 354 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 SNIP1Q8TAD8 396 aaKnown RBP12.4□□□□□ -0.42
TRAF4-202ENST00000262396 ASB12Q8WXK4 309 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 HMCESQ96FZ2 354 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 EXOC2Q96KP1 924 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 CNPY3Q9BT09 278 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.4□□□□□ -0.42
TRAF4-202ENST00000262396 ZNF212Q9UDV6 495 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 GGT7Q9UJ14 662 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 SALL4Q9UJQ4 1053 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 FREM2Q5SZK8 3169 aa12.4□□□□□ -0.42
TRAF4-202ENST00000262396 TP53BP1Q12888 1972 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-202ENST00000262396 ARHGAP42A6NI28 874 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 LGALS16A8MUM7 142 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 TMCO5BA8MYB1 307 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 TOR1BO14657 336 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 UNGP13051 313 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-202ENST00000262396 PSMA2P25787 234 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 EIF4A3P38919 411 aaKnown RBP12.39□□□□□ -0.43
TRAF4-202ENST00000262396 SUOXP51687 545 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 ZNF143P52747 638 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-202ENST00000262396 AIF1P55008 147 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 UCNP55089 124 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 LRRC14Q15048 493 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 ELOCQ15369 112 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 TCEA2Q15560 299 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 FILIP1LQ4L180 1135 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 INO80DQ53TQ3 878 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-202ENST00000262396 MANEALQ5VSG8 457 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 GUSBP11Q6P575 273 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 ENPP7Q6UWV6 458 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 RBM44Q6ZP01 1051 aaKnown RBP12.39□□□□□ -0.43
TRAF4-202ENST00000262396 DNAAF5Q86Y56 855 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 PHF13Q86YI8 300 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-202ENST00000262396 HID1Q8IV36 788 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 NETO2Q8NC67 525 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 KCNE4Q8WWG9 221 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 SLC39A7Q92504 469 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 CENPIQ92674 756 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-202ENST00000262396 NAT6Q93015 286 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 PCDHB18PQ96TA0 734 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 MAGEB5Q9BZ81 275 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 NAT10Q9H0A0 1025 aaKnown RBP12.39□□□□□ -0.43
TRAF4-202ENST00000262396 POLR1BQ9H9Y6 1135 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 SP110Q9HB58 689 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 KNTC1P50748 2209 aa12.39□□□□□ -0.43
TRAF4-202ENST00000262396 TMEM110-MUSTN1A8MSY1 372 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 EEF2KO00418 725 aaKnown RBP12.38□□□□□ -0.43
TRAF4-202ENST00000262396 TPP1O14773 563 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 EPHB6O15197 1021 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 KLK10O43240 276 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 RNF8O76064 485 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 CD160O95971 181 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 ALPIP09923 528 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 TMPRSS3P57727 454 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 PFN3P60673 137 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 SPIDRQ14159 915 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 ACAD10Q6JQN1 1059 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 MACC1Q6ZN28 852 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 GKN2Q86XP6 184 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 SPACA3Q8IXA5 215 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 RBFAQ8N0V3 343 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 FSTL5Q8N475 847 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-202ENST00000262396 WDR48Q8TAF3 677 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 CCDC97Q96F63 343 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-202ENST00000262396 CINPQ9BW66 212 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-202ENST00000262396 DHX35Q9H5Z1 703 aaKnown RBP12.38□□□□□ -0.43
TRAF4-202ENST00000262396 LMBRD1Q9NUN5 540 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 PARVAQ9NVD7 372 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 SIRPGQ9P1W8 387 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 LIMA1Q9UHB6 759 aaKnown RBP12.38□□□□□ -0.43
TRAF4-202ENST00000262396 MOSPD1Q9UJG1 213 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 FZD10Q9ULW2 581 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 SIK3Q9Y2K2 1263 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 RAI2Q9Y5P3 530 aa12.38□□□□□ -0.43
TRAF4-202ENST00000262396 TEX51A0A1B0GUA7 166 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 DFFAO00273 331 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 PALMO75781 387 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 RASGRP1O95267 797 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 PIGNO95427 931 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 TNFP01375 233 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 PCCBP05166 539 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 TIMP2P16035 220 aa12.37□□□□□ -0.43
TRAF4-202ENST00000262396 SERPINA4P29622 427 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms