RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 GJD3Q8N144 294 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 ZNF513Q8N8E2 541 aaPredicted RBP27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 IPMKQ8NFU5 416 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 NFU1Q9UMS0 254 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 E7EVH7 732 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 KIAA0754O94854 1291 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 ECHS1P30084 290 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 PDCD2Q16342 344 aaPredicted RBP27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 SERPINA13PQ6UXR4 307 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 NAT8LQ8N9F0 302 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 FBXO25Q8TCJ0 367 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 VOPP1Q96AW1 172 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 ARHGEF3Q9NR81 526 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 ANAPC5Q9UJX4 755 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 FBXL21Q9UKT6 434 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 PCDHGC4Q9Y5F7 938 aa27.8■■■□□ 2.04
SMARCD3-201ENST00000262188 TARSL2A2RTX5 802 aaKnown RBP27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 TIMM44O43615 452 aa27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 FDFT1P37268 417 aa27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 NNMTP40261 264 aa27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 GRSF1Q12849 480 aaKnown RBP eCLIP27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 HIBCHQ6NVY1 386 aaPredicted RBP27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 OR2AP1Q8NGE2 309 aa27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 OR2A12Q8NGT7 310 aa27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 PTPRN2Q92932 1015 aa27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 POLR3BQ9NW08 1133 aaPredicted RBP27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 THAP10Q9P2Z0 257 aaPredicted RBP27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 MTF2Q9Y483 593 aaPredicted RBP27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 ZNF189O75820 626 aaPredicted RBP27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 PIGNO95427 931 aa27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 CCT5P48643 541 aa27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 HLTFQ14527 1009 aaKnown RBP eCLIP27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 ALG1LQ6GMV1 187 aa27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 IFT20Q8IY31 132 aa27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 UCMAQ8WVF2 138 aa27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 PRCCQ92733 491 aaPredicted RBP27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 NUDCD1Q96RS6 583 aa27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 TMEM245Q9H330 911 aa27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 CAPN7Q9Y6W3 813 aa27.79■■■□□ 2.04
SMARCD3-201ENST00000262188 AGTP01019 485 aa27.78■■■□□ 2.04
SMARCD3-201ENST00000262188 TNFRSF4P43489 277 aa27.78■■■□□ 2.04
SMARCD3-201ENST00000262188 CCNHP51946 323 aaPredicted RBP27.78■■■□□ 2.04
SMARCD3-201ENST00000262188 KDELC1Q6UW63 502 aa27.78■■■□□ 2.04
SMARCD3-201ENST00000262188 PPIL6Q8IXY8 311 aa27.78■■■□□ 2.04
SMARCD3-201ENST00000262188 CHPFQ8IZ52 775 aa27.78■■■□□ 2.04
SMARCD3-201ENST00000262188 MRGPRX2Q96LB1 330 aa27.78■■■□□ 2.04
SMARCD3-201ENST00000262188 ZDHHC18Q9NUE0 388 aa27.78■■■□□ 2.04
SMARCD3-201ENST00000262188 WHRNQ9P202 907 aa27.78■■■□□ 2.04
SMARCD3-201ENST00000262188 STARD13Q9Y3M8 1113 aa27.78■■■□□ 2.04
SMARCD3-201ENST00000262188 CALCOCO2Q13137 446 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 CARD16Q5EG05 197 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 KCTD11Q693B1 232 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 NCEH1Q6PIU2 408 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 CAMK1DQ8IU85 385 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 SIX5Q8N196 739 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 PCDH20Q8N6Y1 951 aaKnown RBP27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 GRIN3AQ8TCU5 1115 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 ART4Q93070 314 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 ISG20Q96AZ6 181 aaKnown RBP27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 CEP44Q9C0F1 390 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 ZDHHC6Q9H6R6 413 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 AVILO75366 819 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 BANF1O75531 89 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 IGSF6O95976 241 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 GLULP15104 373 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 ITIH2P19823 946 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 CHRNA4P43681 627 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 DRG2P55039 364 aaKnown RBP27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 WNT3AP56704 352 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 PRPSAP1Q14558 356 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 C4orf22Q6V702 233 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 NUDT18Q6ZVK8 323 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 GDAP1L1Q96MZ0 367 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 FICDQ9BVA6 458 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 FAM114A2Q9NRY5 505 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 FAM153AQ9UHL3 310 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 STON1Q9Y6Q2 735 aa27.77■■■□□ 2.04
SMARCD3-201ENST00000262188 SIN3BO75182 1162 aa27.76■■■□□ 2.03
SMARCD3-201ENST00000262188 DRD1P21728 446 aa27.76■■■□□ 2.03
SMARCD3-201ENST00000262188 HSPA9P38646 679 aaKnown RBP27.76■■■□□ 2.03
SMARCD3-201ENST00000262188 SNRPD1P62314 119 aaKnown RBP27.76■■■□□ 2.03
SMARCD3-201ENST00000262188 NSUN2Q08J23 767 aaKnown RBP eCLIP27.76■■■□□ 2.03
SMARCD3-201ENST00000262188 POM121L1PQ3SYA9 428 aa27.76■■■□□ 2.03
SMARCD3-201ENST00000262188 TTC19Q6DKK2 380 aaPredicted RBP27.76■■■□□ 2.03
SMARCD3-201ENST00000262188 FAM76AQ8TAV0 307 aa27.76■■■□□ 2.03
SMARCD3-201ENST00000262188 TADA1Q96BN2 335 aa27.76■■■□□ 2.03
SMARCD3-201ENST00000262188 SMIM14Q96QK8 99 aa27.76■■■□□ 2.03
SMARCD3-201ENST00000262188 AP2A1O95782 977 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 SYF2O95926 243 aaKnown RBP27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 EPHX1P07099 455 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 EZRP15311 586 aaKnown RBP27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 TRAF2Q12933 501 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 MYLK3Q32MK0 819 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 PKN3Q6P5Z2 889 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 ZNF534Q76KX8 674 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 PDCD6IPQ8WUM4 868 aaKnown RBP27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 FOXQ1Q9C009 403 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 CHKBQ9Y259 395 aa27.75■■■□□ 2.03
SMARCD3-201ENST00000262188 ANKRD36A6QL64 1941 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms