RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 FAM167BQ9BTA0 163 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 THTPAQ9BU02 230 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 CFHR5Q9BXR6 569 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 SHCBP1LQ9BZQ2 653 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 FAM96AQ9H5X1 160 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 ACTL7AQ9Y615 435 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 KLHL2O95198 593 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 COL6A2P12110 1019 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 RING1Q06587 406 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 LBRQ14739 615 aaKnown RBP21.87■■□□□ 1.09
CLN6-201ENST00000249806 ARL13AQ5H913 290 aaPredicted RBP21.87■■□□□ 1.09
CLN6-201ENST00000249806 LDB1Q86U70 411 aaPredicted RBP21.87■■□□□ 1.09
CLN6-201ENST00000249806 SLAIN1Q8ND83 568 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 RDH11Q8TC12 318 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 SH3TC2Q8TF17 1288 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 PPP1R36Q96LQ0 422 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 DRC3Q9H069 523 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 ILKAPQ9H0C8 392 aaPredicted RBP21.87■■□□□ 1.09
CLN6-201ENST00000249806 DCLRE1BQ9H816 532 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 MID2Q9UJV3 735 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 KCTD3Q9Y597 815 aa21.87■■□□□ 1.09
CLN6-201ENST00000249806 A0A0D9SEW6 157 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 H7C4K7 107 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 DLX3O60479 287 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 SLC6A4P31645 630 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 PARP15Q460N3 678 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 LGI2Q8N0V4 545 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 PHTF2Q8N3S3 785 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 SEMA3CQ99985 751 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 E9PBE3 544 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 KLHL41O60662 606 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 PQBP1O60828 265 aaKnown RBP21.86■■□□□ 1.09
CLN6-201ENST00000249806 H2AFYO75367 372 aaKnown RBP21.86■■□□□ 1.09
CLN6-201ENST00000249806 CRABP2P29373 138 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 POLD2P49005 469 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 ARSDP51689 593 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 CCL23P55773 120 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 ELAVL2Q12926 359 aaKnown RBP21.86■■□□□ 1.09
CLN6-201ENST00000249806 TADA1Q96BN2 335 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 SGF29Q96ES7 293 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 OR52B2Q96RD2 323 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 RANBP9Q96S59 729 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 OLFM1Q99784 485 aa21.86■■□□□ 1.09
CLN6-201ENST00000249806 MAGEC1O60732 1142 aa21.85■■□□□ 1.09
CLN6-201ENST00000249806 KRT36O76013 467 aa21.85■■□□□ 1.09
CLN6-201ENST00000249806 UPP2O95045 317 aa21.85■■□□□ 1.09
CLN6-201ENST00000249806 PIGNO95427 931 aa21.85■■□□□ 1.09
CLN6-201ENST00000249806 ATXN1LP0C7T5 689 aaKnown RBP21.85■■□□□ 1.09
CLN6-201ENST00000249806 CPOXP36551 454 aa21.85■■□□□ 1.09
CLN6-201ENST00000249806 SLC12A2P55011 1212 aa21.85■■□□□ 1.09
CLN6-201ENST00000249806 SLC25A3Q00325 362 aa21.85■■□□□ 1.09
CLN6-201ENST00000249806 TLDC1Q6P9B6 456 aa21.85■■□□□ 1.09
CLN6-201ENST00000249806 LCA5Q86VQ0 697 aa21.85■■□□□ 1.09
CLN6-201ENST00000249806 SCUBE1Q8IWY4 988 aa21.85■■□□□ 1.09
CLN6-201ENST00000249806 REM2Q8IYK8 340 aaPredicted RBP21.85■■□□□ 1.09
CLN6-201ENST00000249806 ARHGAP24Q8N264 748 aa21.85■■□□□ 1.09
CLN6-201ENST00000249806 OR6P1Q8NGX9 317 aa21.85■■□□□ 1.09
CLN6-201ENST00000249806 HEXDCQ8WVB3 486 aa21.85■■□□□ 1.09
CLN6-201ENST00000249806 GOLGA8QA0A0J9YX86 632 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 GOLGA8OA6NCC3 632 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 OR51F1A6NGY5 319 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 GOLGA8NF8WBI6 632 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 DCXO43602 365 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 GJB5O95377 273 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 OR1D2P34982 312 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 RAP1GDS1P52306 607 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 POU4F1Q01851 419 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 SMARCB1Q12824 385 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 TMC7Q7Z402 723 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 OR52K2Q8NGK3 314 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 HDAC10Q969S8 669 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 C1orf21Q9H246 121 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 WDR55Q9H6Y2 383 aaPredicted RBP21.84■■□□□ 1.09
CLN6-201ENST00000249806 ZDHHC2Q9UIJ5 367 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 RAP2CQ9Y3L5 183 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 LOC100653049A0A140TA62 436 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 LOC285095A0A1B0GVY8 99 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 MROH6A6NGR9 719 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 F5H5T6 163 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 BUD23O43709 281 aaKnown RBP21.84■■□□□ 1.09
CLN6-201ENST00000249806 ZBTB14O43829 449 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 PRAMEF11O60813 436 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 KRT34O76011 436 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 TM7SF2O76062 418 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 MYL4P12829 197 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 LEPRP48357 1165 aaKnown RBP21.84■■□□□ 1.09
CLN6-201ENST00000249806 YBEYP58557 167 aaPredicted RBP21.84■■□□□ 1.09
CLN6-201ENST00000249806 TNK2Q07912 1038 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 CSHL1Q14406 222 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 PTPRCAPQ14761 206 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 RNF135Q8IUD6 432 aa21.84■■□□□ 1.09
CLN6-201ENST00000249806 MATN2O00339 956 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 PITPNM1O00562 1244 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 GNRH1P01148 92 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 TFEBP19484 476 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 ATP5C1P36542 298 aaKnown RBP21.83■■□□□ 1.09
CLN6-201ENST00000249806 PTDSS1P48651 473 aaKnown RBP21.83■■□□□ 1.09
CLN6-201ENST00000249806 MAPKAPK2P49137 400 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 ERFP50548 548 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 RPL14P50914 215 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms