RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 STMN1P16949 149 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 CRABP2P29373 138 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 MPP1Q00013 466 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 ZBTB16Q05516 673 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 IHHQ14623 411 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 CES4AQ5XG92 561 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 CLNKQ7Z7G1 428 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 TUBB6Q9BUF5 446 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 WWP1Q9H0M0 922 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 FAM95CA0A1B0GW59 222 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 H2AFYO75367 372 aaKnown RBP23.47■■□□□ 1.35
MSX2-201ENST00000239243 F11P03951 625 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 F7P08709 466 aaPredicted RBP23.47■■□□□ 1.35
MSX2-201ENST00000239243 SLC1A6P48664 564 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 RAB10P61026 200 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 SMAD3P84022 425 aaKnown RBP23.47■■□□□ 1.35
MSX2-201ENST00000239243 NECAB2Q7Z6G3 386 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 TMEM150AQ86TG1 271 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 WDR75Q8IWA0 830 aaKnown RBP23.47■■□□□ 1.35
MSX2-201ENST00000239243 OR52K2Q8NGK3 314 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 ACE2Q9BYF1 805 aaPredicted RBP23.47■■□□□ 1.35
MSX2-201ENST00000239243 FAM96AQ9H5X1 160 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 ZNF358Q9NW07 568 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 TTC24A2A3L6 582 aaPredicted RBP23.46■■□□□ 1.35
MSX2-201ENST00000239243 TYW5A2RUC4 315 aaKnown RBP23.46■■□□□ 1.35
MSX2-201ENST00000239243 LILRB3O75022 631 aa23.46■■□□□ 1.35
MSX2-201ENST00000239243 IRF9Q00978 393 aa23.46■■□□□ 1.35
MSX2-201ENST00000239243 ASRGL1Q7L266 308 aa23.46■■□□□ 1.35
MSX2-201ENST00000239243 ACVR1CQ8NER5 493 aa23.46■■□□□ 1.35
MSX2-201ENST00000239243 SKA1Q96BD8 255 aa23.46■■□□□ 1.35
MSX2-201ENST00000239243 ZBP1Q9H171 429 aa23.46■■□□□ 1.35
MSX2-201ENST00000239243 TRPC7Q9HCX4 862 aa23.46■■□□□ 1.35
MSX2-201ENST00000239243 ACOT9Q9Y305 439 aa23.46■■□□□ 1.35
MSX2-201ENST00000239243 PLXNA4Q9HCM2 1894 aa23.46■■□□□ 1.35
MSX2-201ENST00000239243 E2F8A0AVK6 867 aa23.45■■□□□ 1.35
MSX2-201ENST00000239243 ACRP10323 421 aa23.45■■□□□ 1.35
MSX2-201ENST00000239243 SLC12A2P55011 1212 aa23.45■■□□□ 1.35
MSX2-201ENST00000239243 PRAMEP78395 509 aa23.45■■□□□ 1.35
MSX2-201ENST00000239243 POU4F1Q01851 419 aa23.45■■□□□ 1.35
MSX2-201ENST00000239243 TBC1D1Q86TI0 1168 aaPredicted RBP23.45■■□□□ 1.35
MSX2-201ENST00000239243 OR13J1Q8NGT2 312 aa23.45■■□□□ 1.35
MSX2-201ENST00000239243 PIWIL2Q8TC59 973 aaKnown RBP23.45■■□□□ 1.35
MSX2-201ENST00000239243 MFSD1Q9H3U5 465 aa23.45■■□□□ 1.35
MSX2-201ENST00000239243 FGF18O76093 207 aa23.45■■□□□ 1.34
MSX2-201ENST00000239243 NDST3O95803 873 aa23.45■■□□□ 1.34
MSX2-201ENST00000239243 OLFM2O95897 454 aa23.45■■□□□ 1.34
MSX2-201ENST00000239243 CTSAP10619 480 aa23.45■■□□□ 1.34
MSX2-201ENST00000239243 NQO1P15559 274 aaKnown RBP23.45■■□□□ 1.34
MSX2-201ENST00000239243 SAT1P21673 171 aa23.45■■□□□ 1.34
MSX2-201ENST00000239243 LEPRP48357 1165 aaKnown RBP23.45■■□□□ 1.34
MSX2-201ENST00000239243 SLC41A1Q8IVJ1 513 aa23.45■■□□□ 1.34
MSX2-201ENST00000239243 INPP5DQ92835 1189 aa23.45■■□□□ 1.34
MSX2-201ENST00000239243 ZFRQ96KR1 1074 aaKnown RBP23.45■■□□□ 1.34
MSX2-201ENST00000239243 MUC3BQ9H195 1237 aa23.45■■□□□ 1.34
MSX2-201ENST00000239243 STN1Q9H668 368 aaKnown RBP23.45■■□□□ 1.34
MSX2-201ENST00000239243 TASP1Q9H6P5 420 aa23.45■■□□□ 1.34
MSX2-201ENST00000239243 IL23AQ9NPF7 189 aa23.45■■□□□ 1.34
MSX2-201ENST00000239243 ARHGEF3Q9NR81 526 aa23.45■■□□□ 1.34
MSX2-201ENST00000239243 SMPD4Q9NXE4 827 aa23.45■■□□□ 1.34
MSX2-201ENST00000239243 RIMKLBQ9ULI2 386 aa23.45■■□□□ 1.34
MSX2-201ENST00000239243 ARIH1Q9Y4X5 557 aaPredicted RBP23.45■■□□□ 1.34
MSX2-201ENST00000239243 KIAA1671Q9BY89 1806 aa23.45■■□□□ 1.34
MSX2-201ENST00000239243 TSPAN3O60637 253 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 HAUS5O94927 633 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 SLC35E2BP0CK96 405 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 SERPINB3P29508 390 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 SGSHP51688 502 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 CLCN5P51795 746 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 KPNA2P52292 529 aaKnown RBP23.44■■□□□ 1.34
MSX2-201ENST00000239243 PRKAA2P54646 552 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 TSNAXIP1Q2TAA8 658 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 PACS2Q86VP3 889 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 C1QTNF1Q9BXJ1 281 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 C20orf27Q9GZN8 174 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 ZNF334Q9HCZ1 680 aaPredicted RBP23.44■■□□□ 1.34
MSX2-201ENST00000239243 A0A087X1B8 175 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 LDB2O43679 373 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 RNF219Q5W0B1 726 aaPredicted RBP23.44■■□□□ 1.34
MSX2-201ENST00000239243 CYB5D1Q6P9G0 228 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 HJURPQ8NCD3 748 aaPredicted RBP23.44■■□□□ 1.34
MSX2-201ENST00000239243 BRSK1Q8TDC3 778 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 ELMO2Q96JJ3 720 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 IL21Q9HBE4 155 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 KLC4Q9NSK0 619 aa23.44■■□□□ 1.34
MSX2-201ENST00000239243 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.44■■□□□ 1.34
MSX2-201ENST00000239243 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.44■■□□□ 1.34
MSX2-201ENST00000239243 CBX4O00257 560 aa23.43■■□□□ 1.34
MSX2-201ENST00000239243 PHGDHO43175 533 aaKnown RBP23.43■■□□□ 1.34
MSX2-201ENST00000239243 C1RP00736 705 aa23.43■■□□□ 1.34
MSX2-201ENST00000239243 CA8P35219 290 aa23.43■■□□□ 1.34
MSX2-201ENST00000239243 ACVR1Q04771 509 aa23.43■■□□□ 1.34
MSX2-201ENST00000239243 ITGA9Q13797 1035 aa23.43■■□□□ 1.34
MSX2-201ENST00000239243 CXorf57Q6NSI4 855 aaKnown RBP23.43■■□□□ 1.34
MSX2-201ENST00000239243 OTOP2Q7RTS6 562 aa23.43■■□□□ 1.34
MSX2-201ENST00000239243 TNS4Q8IZW8 715 aa23.43■■□□□ 1.34
MSX2-201ENST00000239243 FIBCD1Q8N539 461 aa23.43■■□□□ 1.34
MSX2-201ENST00000239243 LRMDAQ9H2I8 198 aa23.43■■□□□ 1.34
MSX2-201ENST00000239243 ZNF395Q9H8N7 513 aaPredicted RBP23.43■■□□□ 1.34
MSX2-201ENST00000239243 TMEM114B3SHH9 223 aa23.43■■□□□ 1.34
MSX2-201ENST00000239243 G3V2L1 256 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms