RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 ADARP55265 1226 aaKnown RBP11.64□□□□□ -0.55
LAMA4-201ENST00000230538 NAA20P61599 178 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 ZIK1Q3SY52 487 aaPredicted RBP11.64□□□□□ -0.55
LAMA4-201ENST00000230538 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.64□□□□□ -0.55
LAMA4-201ENST00000230538 NARS2Q96I59 477 aaKnown RBP11.64□□□□□ -0.55
LAMA4-201ENST00000230538 Q96MT0 163 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 SLC39A8Q9C0K1 460 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 UBAP1Q9NZ09 502 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 OR10H2O60403 315 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 FTH1P02794 183 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 ITGA2P17301 1181 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 TFEBP19484 476 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 RPL38P63173 70 aaKnown RBP11.64□□□□□ -0.55
LAMA4-201ENST00000230538 NOL9Q5SY16 702 aaKnown RBP11.64□□□□□ -0.55
LAMA4-201ENST00000230538 B3GNT6Q6ZMB0 384 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 POLNQ7Z5Q5 900 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 PROSER1Q86XN7 944 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 RGL4Q8IZJ4 473 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 SMYD1Q8NB12 490 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 PWWP2AQ96N64 755 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 RNF157Q96PX1 679 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 SLC38A2Q96QD8 506 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 EPB41L1Q9H4G0 881 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 PCYOX1Q9UHG3 505 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 SH3GLB1Q9Y371 365 aa11.64□□□□□ -0.55
LAMA4-201ENST00000230538 COL3A1P02461 1466 aaPredicted RBP11.64□□□□□ -0.55
LAMA4-201ENST00000230538 RCCD1A6NED2 376 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 ITGAVP06756 1048 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 RPL22P35268 128 aaKnown RBP11.63□□□□□ -0.55
LAMA4-201ENST00000230538 MAPK8P45983 427 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 CLK3P49761 638 aaKnown RBP11.63□□□□□ -0.55
LAMA4-201ENST00000230538 HNMTP50135 292 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 RALGDSQ12967 914 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 ITGADQ13349 1161 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 XKR6Q5GH73 641 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 PAGE2Q7Z2X7 111 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 MYLPFQ96A32 169 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 CXorf40BQ96DE9 158 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 CLIP3Q96DZ5 547 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 TMPRSS4Q9NRS4 437 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 CRNNQ9UBG3 495 aaPredicted RBP11.63□□□□□ -0.55
LAMA4-201ENST00000230538 TNFSF13BQ9Y275 285 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 MGRN1O60291 552 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 RCVRNP35243 200 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 MRPS6P82932 125 aaKnown RBP11.63□□□□□ -0.55
LAMA4-201ENST00000230538 DMPKQ09013 629 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 RNF43Q68DV7 783 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 R3HCC1LQ7Z5L2 792 aaKnown RBP11.63□□□□□ -0.55
LAMA4-201ENST00000230538 EEF1AKMT1Q8WVE0 214 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 ART4Q93070 314 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 MYDGFQ969H8 173 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 IDI2Q9BXS1 227 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 ATXN2Q99700 1313 aaKnown RBP11.63□□□□□ -0.55
LAMA4-201ENST00000230538 MAP2K7O14733 419 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 OPLAHO14841 1288 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 SMIM10L2AP0DMW4 78 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 SMIM10L2BP0DMW5 78 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 RPL3P39023 403 aaKnown RBP11.63□□□□□ -0.55
LAMA4-201ENST00000230538 AUHQ13825 339 aaKnown RBP11.63□□□□□ -0.55
LAMA4-201ENST00000230538 ATP13A4Q4VNC1 1196 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 LRRC38Q5VT99 294 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 BROXQ5VW32 411 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 TTC7BQ86TV6 843 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 KIAA0319LQ8IZA0 1049 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 DSELQ8IZU8 1212 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 KCTD4Q8WVF5 259 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 MRPL57Q9BQC6 102 aaKnown RBP11.63□□□□□ -0.55
LAMA4-201ENST00000230538 PACSIN3Q9UKS6 424 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 PSME3P61289 254 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 USP46P62068 366 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 RHAGQ02094 409 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 CHPFQ8IZ52 775 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 FUKQ8N0W3 1084 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 AGAP11Q8TF27 550 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 PTCD3Q96EY7 689 aaKnown RBP11.63□□□□□ -0.55
LAMA4-201ENST00000230538 HSFY1Q96LI6 401 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 ZNF558Q96NG5 402 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 C1QTNF3-AMACRE9PGA6 284 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 EPHB6O15197 1021 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 ULK1O75385 1050 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 NR2F1P10589 423 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 TSPAN8P19075 237 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 PRKCIP41743 596 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 CREMQ03060 361 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 TTC27Q6P3X3 843 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 BHLHB9Q6PI77 547 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 GPRIN3Q6ZVF9 776 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 IFNLR1Q8IU57 520 aaPredicted RBP11.63□□□□□ -0.55
LAMA4-201ENST00000230538 RIOX2Q8IUF8 465 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 FBXW8Q8N3Y1 598 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 EIF1ADQ8N9N8 165 aaKnown RBP11.63□□□□□ -0.55
LAMA4-201ENST00000230538 GPR156Q8NFN8 814 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 OR7A2PQ8NGA2 310 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 TM6SF2Q9BZW4 377 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 ASAH2Q9NR71 780 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 KCND1Q9NSA2 647 aa11.63□□□□□ -0.55
LAMA4-201ENST00000230538 RGSL1A5PLK6 1076 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 CARNS1A5YM72 827 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 SCAMP3O14828 347 aaKnown RBP11.62□□□□□ -0.55
LAMA4-201ENST00000230538 TSHRP16473 764 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms