RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 POU4F1Q01851 419 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 BRMS1LQ5PSV4 323 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 ARTNQ5T4W7 220 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 CNSTQ6PJW8 725 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 TRIM67Q6ZTA4 783 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 BEND5Q7L4P6 421 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 LILRA2Q8N149 483 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 LZTR1Q8N653 840 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 SGF29Q96ES7 293 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 MRGPRX2Q96LB1 330 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 PPP1R2P1Q96PQ5 205 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 HAPLN3Q96S86 360 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 NPAS2Q99743 824 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 TRPV6Q9H1D0 765 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 IGSF5Q9NSI5 407 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 RAB26Q9ULW5 256 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 MIA3Q5JRA6 1907 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 ACOT8O14734 319 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 PMPCBO75439 489 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 PAGE1O75459 146 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 ODC1P11926 461 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 CPB1P15086 417 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 HTR7P34969 479 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 CHRNA4P43681 627 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 MRPS6P82932 125 aaKnown RBP16.43■□□□□ 0.22
LTBR-201ENST00000228918 SULT2A1Q06520 285 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 UPP1Q16831 310 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 ADCY4Q8NFM4 1077 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 CEP70Q8NHQ1 597 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 TRIM62Q9BVG3 475 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 FSD1LQ9BXM9 530 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 Q9H521 79 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 SUDS3Q9H7L9 328 aaPredicted RBP16.43■□□□□ 0.22
LTBR-201ENST00000228918 CATSPERBQ9H7T0 1116 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 COPS7BQ9H9Q2 264 aaPredicted RBP16.43■□□□□ 0.22
LTBR-201ENST00000228918 NDFIP2Q9NV92 336 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 TMLHEQ9NVH6 421 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 GTSE1Q9NYZ3 720 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 FBXO5Q9UKT4 447 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 ST3GAL5Q9UNP4 418 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 NLRC5Q86WI3 1866 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 TRPM7Q96QT4 1865 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 NEMP2A6NFY4 417 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 AURKAO14965 403 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 PMLP29590 882 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 RPL9P32969 192 aaKnown RBP16.42■□□□□ 0.22
LTBR-201ENST00000228918 TECRLQ5HYJ1 363 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 MORN1Q5T089 497 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 ZNF280DQ6N043 979 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 TAF2Q6P1X5 1199 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 RANBP10Q6VN20 620 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 GK5Q6ZS86 529 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 TMA16Q96EY4 203 aaKnown RBP16.42■□□□□ 0.22
LTBR-201ENST00000228918 KLHL32Q96NJ5 620 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 PKMYT1Q99640 499 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 ACBD6Q9BR61 282 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 RBM22Q9NW64 420 aaKnown RBP eCLIP16.42■□□□□ 0.221e-9■□□□□ 9.3
LTBR-201ENST00000228918 SMIM31A0A1B0GVY4 71 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 CRTAMO95727 393 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 CAPNS1P04632 268 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 HNRNPLP14866 589 aaKnown RBP eCLIP16.42■□□□□ 0.229e-7■■■■□ 20.6
LTBR-201ENST00000228918 SLC12A2P55011 1212 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 MAP2K5Q13163 448 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 SEPT6Q14141 434 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 RBM20Q5T481 1227 aaKnown RBP16.42■□□□□ 0.22
LTBR-201ENST00000228918 TIGD7Q6NT04 549 aaPredicted RBP16.42■□□□□ 0.22
LTBR-201ENST00000228918 AGMOQ6ZNB7 445 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 SCAMP5Q8TAC9 235 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 PRKD2Q9BZL6 878 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 AP5M1Q9H0R1 490 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 ATXN3LQ9H3M9 355 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 EPB41L1Q9H4G0 881 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 UTP6Q9NYH9 597 aaKnown RBP16.42■□□□□ 0.22
LTBR-201ENST00000228918 UBAP1Q9NZ09 502 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 AP4B1Q9Y6B7 739 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 COMMD3-BMI1R4GMX3 469 aa16.42■□□□□ 0.22
LTBR-201ENST00000228918 TRIM38O00635 465 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 PFKPQ01813 784 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 PTK2BQ14289 1009 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 CSHL1Q14406 222 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 AFMIDQ63HM1 303 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 NEPROQ6NW34 567 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 KIAA0408Q6ZU52 694 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 CHSY3Q70JA7 882 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 SATL1Q86VE3 508 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 HMGCLL1Q8TB92 370 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 NAT14Q8WUY8 206 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 PTPN18Q99952 460 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 PKP2Q99959 881 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 CHST12Q9NRB3 414 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 TBC1D13Q9NVG8 400 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 GIT1Q9Y2X7 761 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 SH3BP1Q9Y3L3 701 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 TRPV2Q9Y5S1 764 aa16.41■□□□□ 0.22
LTBR-201ENST00000228918 KCNU1A8MYU2 1149 aa16.4■□□□□ 0.22
LTBR-201ENST00000228918 M0QZ92 97 aa16.4■□□□□ 0.22
LTBR-201ENST00000228918 MSI1O43347 362 aaKnown RBP16.4■□□□□ 0.22
LTBR-201ENST00000228918 ATXN3P54252 364 aaPredicted RBP16.4■□□□□ 0.22
LTBR-201ENST00000228918 PURAQ00577 322 aaKnown RBP16.4■□□□□ 0.22
LTBR-201ENST00000228918 LRRC23Q53EV4 343 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms