RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 C10orf71Q711Q0 1435 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 PAPSS1O43252 624 aaPredicted RBP11.6□□□□□ -0.55
NOD1-201ENST00000222823 TNFAIP8O95379 198 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 PSMG1O95456 288 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 TMED10P49755 219 aaKnown RBP11.6□□□□□ -0.55
NOD1-201ENST00000222823 CYP2A13Q16696 494 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 OR52K2Q8NGK3 314 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 DLG3Q92796 817 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 TPD52L3Q96J77 140 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 C9orf16Q9BUW7 83 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 ATP13A3Q9H7F0 1226 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 MAN1C1Q9NR34 630 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 ADPRHL2Q9NX46 363 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 RAP2CQ9Y3L5 183 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 CCDC159P0C7I6 412 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 LPOP22079 712 aaPredicted RBP11.6□□□□□ -0.55
NOD1-201ENST00000222823 AIF1P55008 147 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 LACTB2Q53H82 288 aaPredicted RBP11.6□□□□□ -0.55
NOD1-201ENST00000222823 PACS1Q6VY07 963 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 MON1BQ7L1V2 547 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 ZNF513Q8N8E2 541 aaPredicted RBP11.6□□□□□ -0.55
NOD1-201ENST00000222823 CSPG4P5Q96PW8 444 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 BBS4Q96RK4 519 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 SMAD5Q99717 465 aaKnown RBP11.6□□□□□ -0.55
NOD1-201ENST00000222823 SNX15Q9NRS6 342 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 SYBUQ9NX95 663 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 COL1A2P08123 1366 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 COL22A1Q8NFW1 1626 aaPredicted RBP11.6□□□□□ -0.55
NOD1-201ENST00000222823 TRAV19A0A0A6YYK7 116 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 NT5C1B-RDH14C9J2C7 533 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 EDIL3O43854 480 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 PEX1O43933 1283 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 HS6ST1O60243 411 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 ULK1O75385 1050 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 ANXA6P08133 673 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 SNRPB2P08579 225 aaKnown RBP11.6□□□□□ -0.55
NOD1-201ENST00000222823 PABPC1P11940 636 aaKnown RBP11.6□□□□□ -0.55
NOD1-201ENST00000222823 SOX6P35712 828 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 ARL2P36404 184 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 GBE1Q04446 702 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 NOGQ13253 232 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 PSMD5Q16401 504 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 FAM187BQ17R55 369 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 AFTPHQ6ULP2 937 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 LPCAT2Q7L5N7 544 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 CMC1Q7Z7K0 106 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 STARD8Q92502 1023 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 MTERF3Q96E29 417 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 BPIFA1Q9NP55 256 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 ASAH2Q9NR71 780 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 FBXO10Q9UK96 956 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 CAB39Q9Y376 341 aaPredicted RBP11.6□□□□□ -0.55
NOD1-201ENST00000222823 PCDHB9Q9Y5E1 797 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 CNTNAP1P78357 1384 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 C1orf232A0A0U1RR37 186 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 LINC00854A0A1B0GVQ3 168 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 ATP6AP2A0A1C7CYW4 349 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 RGSL1A5PLK6 1076 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 OR6C75A6NL08 312 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 GPR25O00155 361 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 ATP6AP2O75787 350 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 MLYCDO95822 493 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 NTRK1P04629 796 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 TSPAN8P19075 237 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 OR1D2P34982 312 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 PAGE2BQ5JRK9 111 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 CDK20Q8IZL9 346 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 SPPL2BQ8TCT7 592 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 NKD2Q969F2 451 aaPredicted RBP11.6□□□□□ -0.55
NOD1-201ENST00000222823 CORO1BQ9BR76 489 aa11.6□□□□□ -0.55
NOD1-201ENST00000222823 LAMB1P07942 1786 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 BIRC5O15392 142 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 MAP3K13O43283 966 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 TBL1XO60907 577 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 ZMPSTE24O75844 475 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 RECQL5O94762 991 aaPredicted RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 GSSP48637 474 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 KCNJ2P63252 427 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 PFKPQ01813 784 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 TCEAL1Q15170 157 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 TRIP4Q15650 581 aaPredicted RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 PREPLQ4J6C6 727 aaPredicted RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 XYLT1Q86Y38 959 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 MAGEC3Q8TD91 643 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 SNRNP27Q8WVK2 155 aaKnown RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 ELMO1Q92556 727 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 KLHL5Q96PQ7 755 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 PHACTR1Q9C0D0 580 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 RAD18Q9NS91 495 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 COPG2Q9UBF2 871 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 RPS6KB2Q9UBS0 482 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 PAIP2BQ9ULR5 123 aaKnown RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 MYRFQ9Y2G1 1151 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 VWA7Q9Y334 891 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 MOXD2PA6NHM9 499 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 PTGES3LE9PB15 166 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 H0YGN5 161 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 EDF1O60869 148 aaKnown RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 PAGE1O75459 146 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 FGF1P05230 155 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms