RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CACNG3O60359 315 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 FAM58BPP0C7Q3 252 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 CTGFP29279 349 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 CPT1AP50416 773 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 SH3BGRP55822 239 aaPredicted RBP17.44■□□□□ 0.38
USB1-201ENST00000219281 TAS2R39P59534 338 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 PSME3P61289 254 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 COG7P83436 770 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 PM20D1Q6GTS8 502 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 DENND5AQ6IQ26 1287 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 KLHDC10Q6PID8 442 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 DCLRE1AQ6PJP8 1040 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 BHLHA9Q7RTU4 235 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 KDELC2Q7Z4H8 507 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 TSGA13Q96PP4 275 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 SIK2Q9H0K1 926 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 OSBPL2Q9H1P3 480 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 ZNF696Q9H7X3 374 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 PCDHGA7Q9Y5G6 932 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 MRPL42Q9Y6G3 142 aaKnown RBP17.44■□□□□ 0.38
USB1-201ENST00000219281 MANSC4A6NHS7 340 aaPredicted RBP17.44■□□□□ 0.38
USB1-201ENST00000219281 HHLA1C9JL84 531 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 CAPNS1P04632 268 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 PDAP1Q13442 181 aaKnown RBP17.44■□□□□ 0.38
USB1-201ENST00000219281 TWF2Q6IBS0 349 aaKnown RBP17.44■□□□□ 0.38
USB1-201ENST00000219281 RPS27LQ71UM5 84 aaKnown RBP17.44■□□□□ 0.38
USB1-201ENST00000219281 PTAR1Q7Z6K3 402 aaPredicted RBP17.44■□□□□ 0.38
USB1-201ENST00000219281 TAC4Q86UU9 113 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 PELI3Q8N2H9 469 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 DTNBP1Q96EV8 351 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 ZNF419Q96HQ0 510 aaPredicted RBP17.44■□□□□ 0.38
USB1-201ENST00000219281 ZFRQ96KR1 1074 aaKnown RBP17.44■□□□□ 0.38
USB1-201ENST00000219281 MRPL57Q9BQC6 102 aaKnown RBP17.44■□□□□ 0.38
USB1-201ENST00000219281 PCDHAC1Q9H158 963 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 CYP4F12Q9HCS2 524 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 CHST12Q9NRB3 414 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 RRN3Q9NYV6 651 aa17.44■□□□□ 0.38
USB1-201ENST00000219281 BRCA2P51587 3418 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 E7ENX8 843 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 TRPA1O75762 1119 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 HOXC8P31273 242 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 HSPA13P48723 471 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 POLD2P49005 469 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 MYLK3Q32MK0 819 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 ZNF470Q6ECI4 717 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 PAOXQ6QHF9 649 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 IFNL1Q8IU54 200 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 RNF135Q8IUD6 432 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 KLHDC8BQ8IXV7 354 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 SPPL2BQ8TCT7 592 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 PPP1R10Q96QC0 940 aaKnown RBP17.43■□□□□ 0.38
USB1-201ENST00000219281 SEMA6AQ9H2E6 1030 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 ATXN3LQ9H3M9 355 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 GLOD4Q9HC38 313 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 TRPC7Q9HCX4 862 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 PLK2Q9NYY3 685 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 PTTG2Q9NZH5 202 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 EPS15L1Q9UBC2 864 aa17.43■□□□□ 0.38
USB1-201ENST00000219281 MYADML2A6NDP7 307 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 MEIS3P2A8K0S8 358 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 HSPA1AP0DMV8 641 aaKnown RBP17.42■□□□□ 0.38
USB1-201ENST00000219281 HSPA1BP0DMV9 641 aaKnown RBP17.42■□□□□ 0.38
USB1-201ENST00000219281 ATP5F1P24539 256 aaPredicted RBP17.42■□□□□ 0.38
USB1-201ENST00000219281 CCNCP24863 283 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 CD151P48509 253 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 ZNF135P52742 658 aaPredicted RBP17.42■□□□□ 0.38
USB1-201ENST00000219281 SLC12A2P55011 1212 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 PURAQ00577 322 aaKnown RBP17.42■□□□□ 0.38
USB1-201ENST00000219281 SULT2A1Q06520 285 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 CSHL1Q14406 222 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 NRF1Q16656 503 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 MGAT5BQ3V5L5 792 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 B3GNT6Q6ZMB0 384 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 PIWIL4Q7Z3Z4 852 aaKnown RBP17.42■□□□□ 0.38
USB1-201ENST00000219281 ATPAF2Q8N5M1 289 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 ASB9Q96DX5 294 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 HIC2Q96JB3 615 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 FCRL5Q96RD9 977 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 AP5M1Q9H0R1 490 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 TSPYL2Q9H2G4 693 aaPredicted RBP17.42■□□□□ 0.38
USB1-201ENST00000219281 UTP6Q9NYH9 597 aaKnown RBP17.42■□□□□ 0.38
USB1-201ENST00000219281 Q9Y3F1 56 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 TCAF1Q9Y4C2 921 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 A0A087X1B8 175 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 AURKAO14965 403 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 PMPCBO75439 489 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 ANXA9O76027 345 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 HDCP19113 662 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 SEPT6Q14141 434 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 FSCN1Q16658 493 aaKnown RBP17.42■□□□□ 0.38
USB1-201ENST00000219281 SAPCD2Q86UD0 394 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 C2CD4AQ8NCU7 369 aaPredicted RBP17.42■□□□□ 0.38
USB1-201ENST00000219281 TRPV1Q8NER1 839 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 ZFP28Q8NHY6 868 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 HMGCLL1Q8TB92 370 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 EME1Q96AY2 570 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 TRPV6Q9H1D0 765 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 TNFRSF12AQ9NP84 129 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 IGSF5Q9NSI5 407 aa17.42■□□□□ 0.38
USB1-201ENST00000219281 C17orf102A2RUQ5 167 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms