RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CNBD2Q96M20 576 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 OMDQ99983 421 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 UNC93B1Q9H1C4 597 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 MEAF6Q9HAF1 191 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 IGSF5Q9NSI5 407 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 GTSE1Q9NYZ3 720 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 FBXO5Q9UKT4 447 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 PADI4Q9UM07 663 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 PCDHGA7Q9Y5G6 932 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 MAFKO60675 156 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 PSME3P61289 254 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 MYBPC1Q00872 1141 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 GALNT1Q10472 559 aaPredicted RBP13.43□□□□□ -0.26
SRP54-201ENST00000216774 BIRC2Q13490 618 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 IRF5Q13568 498 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 TRIM25Q14258 630 aaKnown RBP13.43□□□□□ -0.26
SRP54-201ENST00000216774 CNSTQ6PJW8 725 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 ARHGAP36Q6ZRI8 547 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 ALDH16A1Q8IZ83 802 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 SPATA6LQ8N4H0 392 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.43□□□□□ -0.26
SRP54-201ENST00000216774 GABPB2Q8TAK5 448 aaPredicted RBP13.43□□□□□ -0.26
SRP54-201ENST00000216774 SPPL2BQ8TCT7 592 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 DDI1Q8WTU0 396 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 ZNF419Q96HQ0 510 aaPredicted RBP13.43□□□□□ -0.26
SRP54-201ENST00000216774 FSD1LQ9BXM9 530 aa13.43□□□□□ -0.26
SRP54-201ENST00000216774 KCNU1A8MYU2 1149 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 BTBD19C9JJ37 291 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 PDLIM1O00151 329 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 VILLO15195 856 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 OR6B1O95007 311 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 PFKPQ01813 784 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 TRAP1Q12931 704 aaKnown RBP13.42□□□□□ -0.26
SRP54-201ENST00000216774 EIF4EBP2Q13542 120 aaPredicted RBP13.42□□□□□ -0.26
SRP54-201ENST00000216774 ADRM1Q16186 407 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 TECRLQ5HYJ1 363 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 BRMS1LQ5PSV4 323 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 AGAP9Q5VTM2 703 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 TIGD7Q6NT04 549 aaPredicted RBP13.42□□□□□ -0.26
SRP54-201ENST00000216774 NEPROQ6NW34 567 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 RANBP10Q6VN20 620 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 USP50Q70EL3 339 aaPredicted RBP13.42□□□□□ -0.26
SRP54-201ENST00000216774 PLEKHH3Q7Z736 793 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 RIN3Q8TB24 985 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 SLC2A11Q9BYW1 496 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 TRPV6Q9H1D0 765 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 SUDS3Q9H7L9 328 aaPredicted RBP13.42□□□□□ -0.26
SRP54-201ENST00000216774 CATSPERBQ9H7T0 1116 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 ADA2Q9NZK5 511 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 SLC2A6Q9UGQ3 507 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 TIMM13Q9Y5L4 95 aaPredicted RBP13.42□□□□□ -0.26
SRP54-201ENST00000216774 NUP205Q92621 2012 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 BPTFQ12830 3046 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 PSMD12O00232 456 aaPredicted RBP13.42□□□□□ -0.26
SRP54-201ENST00000216774 RNASEH2AO75792 299 aaKnown RBP13.42□□□□□ -0.26
SRP54-201ENST00000216774 IPO13O94829 963 aaKnown RBP13.42□□□□□ -0.26
SRP54-201ENST00000216774 THP07101 528 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 CLCNKBP51801 687 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 APOFQ13790 326 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 LRP8Q14114 963 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 C6orf52Q5T4I8 152 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 MANEALQ5VSG8 457 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 KLC3Q6P597 504 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 B3GNT6Q6ZMB0 384 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 RBM44Q6ZP01 1051 aaKnown RBP13.42□□□□□ -0.26
SRP54-201ENST00000216774 GK5Q6ZS86 529 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 TLK2Q86UE8 772 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 LRRC49Q8IUZ0 686 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 NPLOC4Q8TAT6 608 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 CALML6Q8TD86 181 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 MYLPFQ96A32 169 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 CACNA2D2Q9NY47 1150 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 DMTF1Q9Y222 760 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 AP4S1Q9Y587 144 aa13.42□□□□□ -0.26
SRP54-201ENST00000216774 UBDO15205 165 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 RBP1P09455 135 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 HNRNPLP14866 589 aaKnown RBP eCLIP13.41□□□□□ -0.268e-11■■□□□ 12.2
SRP54-201ENST00000216774 ZNF26P17031 533 aaPredicted RBP13.41□□□□□ -0.26
SRP54-201ENST00000216774 CLCN5P51795 746 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 INHBCP55103 352 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 CDKL1Q00532 357 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 RHDQ02161 417 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 PDAP1Q13442 181 aaKnown RBP13.41□□□□□ -0.26
SRP54-201ENST00000216774 SLC14A2Q15849 920 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.41□□□□□ -0.26
SRP54-201ENST00000216774 NADK2Q4G0N4 442 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 BORAQ6PGQ7 559 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 GALNT7Q86SF2 657 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 METTL25Q8N6Q8 603 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 NMD3Q96D46 503 aaKnown RBP13.41□□□□□ -0.26
SRP54-201ENST00000216774 SGF29Q96ES7 293 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 TSPAN17Q96FV3 270 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 DUS3LQ96G46 650 aaKnown RBP13.41□□□□□ -0.26
SRP54-201ENST00000216774 MS4A4AQ96JQ5 239 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 RHOBTB2Q9BYZ6 727 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 SIK2Q9H0K1 926 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 RBM38Q9H0Z9 239 aaKnown RBP13.41□□□□□ -0.26
SRP54-201ENST00000216774 TRPC7Q9HCX4 862 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 SPAG4Q9NPE6 437 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 CHST12Q9NRB3 414 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms