RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Plin5Q8BVZ1 463 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Psapl1Q8C1C1 522 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Fem1cQ8CEF1 617 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Rprd1aQ8VDS4 312 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Pcdhb3Q91XZ7 784 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Tfap2dQ91ZK0 452 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ttc30a1Q99J38 664 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Lrrc4Q99PH1 652 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ttc30bQ9CY00 664 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Clca1Q9D7Z6 913 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Tmem68Q9D850 329 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 PigqQ9QYT7 581 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Rbck1Q9WUB0 508 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Coro1cQ9WUM4 474 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Pdpk1Q9Z2A0 559 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ern2Q9Z2E3 911 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Sept5Q9Z2Q6 369 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 H2afb2S4R1M3 115 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Myo18aQ9JMH9 2050 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Scn8aQ9WTU3 1978 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 B020011L13RikA0A087WQI7 412 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Tnip3A0A1D5RMN0 279 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Olfr414E9Q5P8 317 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Cdh18E9Q9Q6 790 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 C130060K24RikG3UWA8 416 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 CtsdP18242 410 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Adra2bP30545 450 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Lypla1P97823 230 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 IqcmQ149I8 489 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Srbd1Q497V5 1015 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Proser1Q5PRE5 913 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Lrrc8eQ66JT1 795 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Capn11Q6J756 714 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Tas2r115Q7M719 310 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Defb34Q7TNV8 81 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Mib1Q80SY4 1006 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Rimbp2Q80U40 1072 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Tecpr1Q80VP0 1166 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Slc2a12Q8BFW9 622 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Cnksr3Q8BMA3 555 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 TbcdQ8BYA0 1196 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Podxl2Q8CAE9 603 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 CopaQ8CIE6 1224 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Fnbp1lQ8K012 605 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Rnf208Q8K0W3 265 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Olfr665Q8VG79 316 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Prkag2Q91WG5 566 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 NtpcrQ9CQA9 190 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Pin4Q9CWW6 131 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Anks3Q9CZK6 655 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Kif12Q9D2Z8 642 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Tmbim4Q9DA39 238 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Dusp6Q9DBB1 381 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Xrn2Q9DBR1 951 aaKnown RBP13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ppp1r2Q9DCL8 206 aa13.47□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Gm15262A0A140LIQ5 728 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Aldoart1A6ZI46 419 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Nhsl2B1AXH1 854 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Vmn2r74E9PW21 853 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Znf683I7HJS4 458 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Sgo2bJ3QMK1 1167 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Vmn2r5K7N788 911 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ncam2O35136 837 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 P01648 108 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 AldoaP05064 364 aaKnown RBP13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Acvr1P37172 509 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Gdf5P43027 495 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Timm13P62075 95 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Crnkl1P63154 690 aaKnown RBP13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Adcyap1r1P70205 496 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ctps2P70303 586 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Smad1P70340 465 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Sec1P97353 368 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 UcmaQ14BU0 138 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ak8Q32M07 479 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Gpr174Q3U507 335 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Zfp956Q3UZY6 572 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 1810049J17RikQ3V2G9 153 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Kctd8Q50H33 476 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Rabl6Q5U3K5 725 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Als2clQ60I26 952 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Hmgb4Q6P8W9 181 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Slc41a1Q8BJA2 512 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Mapkap1Q8BKH7 522 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Tubgcp5Q8BKN5 1024 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 PisdQ8BSF4 406 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Amz1Q8BVF9 502 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Trim61Q8JZK6 461 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Adam32Q8K410 754 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Trim7Q923T7 510 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 RragcQ99K70 398 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Duoxa2Q9D311 320 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Hacd2Q9D3B1 254 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Psmd12Q9D8W5 456 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 PignQ9R1S3 931 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Ruvbl2Q9WTM5 463 aaKnown RBP13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Slc2a5Q9WV38 501 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 Trpc7Q9WVC5 862 aa13.46□□□□□ -0.25
Pdlim5-208ENSMUST00000196220 A630010A05RikA9C473 232 aa13.45□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gm15155B1B034 138 aa13.45□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms