RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Cyp4a12aQ91WL5 508 aa12.83□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Fuca2Q99KR8 461 aa12.83□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Lrrc4Q99PH1 652 aa12.83□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Ssxb1Q9CPU1 170 aa12.83□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Rnf181Q9CY62 165 aa12.83□□□□□ -0.35
Rnf4-201ENSMUST00000030992 CinpQ9D0V8 212 aa12.83□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Msl3Q9WVG9 525 aa12.83□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Ighg3A0A1Y7VJN6 399 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cntnap3E9PY62 1287 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Sgo2bJ3QMK1 1167 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Akap10O88845 662 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gdf5P43027 495 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ndst2P52850 883 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cdh6P97326 790 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 4930430A15RikQ05AC5 485 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Serpina3gQ5I2A0 440 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Xlr3aQ60595 226 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Fam120bQ6RI63 786 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Tecpr1Q80VP0 1166 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Anapc2Q8BZQ7 837 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ddx18Q8K363 660 aaKnown RBP12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Clptm1Q8VBZ3 664 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Spon1Q8VCC9 807 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Barhl2Q8VIB5 384 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Pcdhb10Q91VE5 797 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Kif12Q9D2Z8 642 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 VapbQ9QY76 243 aaKnown RBP12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Vmn2r74E9PW21 853 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ptar1E9QAB6 424 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Sult1e1P49891 295 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 AdslP54822 484 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Usp46P62069 366 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 ThraP63058 492 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Rabl6Q5U3K5 725 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Tead4Q62296 427 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 CcncQ62447 283 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cdc14bQ6PFY9 485 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Elmo2Q8BHL5 732 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Metap1Q8BP48 386 aaKnown RBP12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Kank2Q8BX02 843 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Tmem259Q8CIV2 574 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Arhgap18Q8K0Q5 663 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Sgpl1Q8R0X7 568 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Nle1Q8VEJ4 485 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Trmt11Q9CWH5 460 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Il18rapQ9Z2B1 614 aa12.83□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gm45861A0A1B0GRY3 1923 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Fam166bA2AIP0 273 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gm14401A2ARV7 303 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gm13212B1ASQ7 799 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gm5930D3Z257 264 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Olfr596F8VQ26 312 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cyp4f17G3UW78 524 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Bcl7cO08664 217 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ppef1O35655 650 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Fam167bP17257 162 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 PpargP37238 505 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 S100a5P63084 93 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Sppl2bQ3TD49 578 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 FsbpQ8BKE5 299 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Tmem154Q8C4Q9 181 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 D8Ertd738eQ8R1F0 94 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 VitQ8VHI5 650 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 March2Q99M02 246 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cyp4f16Q99N17 524 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Skint6A7XUZ6 1240 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Zfp780bE9Q2S6 806 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Vmn2r44L7N2E1 861 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cd3gP11942 182 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cyth2P63034 400 aaKnown RBP12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ncf4P97369 339 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 AurkaP97477 395 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Zfp607aQ3TQG9 686 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Dusp11Q6NXK5 321 aaKnown RBP12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Rslcan18Q7M6X5 460 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Fstl5Q8BFR2 847 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Tmem198Q8BG75 360 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Znf385bQ8BXJ8 482 aaKnown RBP12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Kcnc4Q8R1C0 628 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 DolkQ8R2Y3 534 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Vps11Q91W86 941 aaKnown RBP12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Prpf19Q99KP6 504 aaKnown RBP12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 ProzQ9CQW3 399 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Vps28Q9D1C8 221 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ubqln5Q9D4I8 510 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Leng1Q9DB98 261 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 GabrqQ9JLF1 638 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cdkl2Q9QUK0 568 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Apobec2Q9WV35 224 aa12.82□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Scn8aQ9WTU3 1978 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ttc30a2A2AKQ8 664 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Vmn2r24D3YUI0 854 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Maml3D4QGC2 1135 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Krt90E9Q1Z0 538 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cyp2w1E9Q816 493 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Spata31E9QAF0 1014 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Adcy1O88444 1118 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Spp1P10923 294 aaKnown RBP12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Lamp2P17047 415 aa12.81□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Atp5jP97450 108 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms