RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 HDAC11Q96DB2 347 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 CABS1Q96KC9 395 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 LGMNQ99538 433 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 EPAS1Q99814 870 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 EBNA1BP2Q99848 306 aaKnown RBP10.43□□□□□ -0.74
PHGDH-224ENST00000641711 BBS2Q9BXC9 721 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 TKTL2Q9H0I9 626 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 LINC00597Q9H2U6 94 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 TBC1D17Q9HA65 648 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 PLAC1Q9HBJ0 212 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 LTB4R2Q9NPC1 389 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 TMPRSS4Q9NRS4 437 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 DONSONQ9NYP3 566 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 SAMD15Q9P1V8 674 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 ZC3H7BQ9UGR2 993 aaKnown RBP10.43□□□□□ -0.74
PHGDH-224ENST00000641711 FBXO10Q9UK96 956 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 SLC27A6Q9Y2P4 619 aa10.43□□□□□ -0.74
PHGDH-224ENST00000641711 CACNA1HO95180 2353 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 IGLV3-10A0A075B6K4 115 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 SYNJ2BP-COX16A0A087WUM0 186 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 A0A1W2PPM1 405 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 KRBA1A5PL33 1030 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 FAM159BA6NKW6 160 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 NEDD8-MDP1E9PL57 170 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 FAM72CH0Y354 149 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 NPC1O15118 1278 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 TM9SF1O15321 606 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 GPR37L1O60883 481 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 AVILO75366 819 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 PAGE1O75459 146 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 ALDH1A2O94788 518 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 MOCS2O96007 188 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-224ENST00000641711 CPP00450 1065 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 INHBAP08476 426 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 TYRP14679 529 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 TAC1P20366 129 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 TACR2P21452 398 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 HOXD9P28356 352 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-224ENST00000641711 SERPINB6P35237 376 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 OPRD1P41143 372 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 RPS9P46781 194 aaKnown RBP10.42□□□□□ -0.74
PHGDH-224ENST00000641711 CLCN5P51795 746 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 NUBP1P53384 320 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 GRSF1Q12849 480 aaKnown RBP eCLIP10.42□□□□□ -0.74
PHGDH-224ENST00000641711 IFT88Q13099 833 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 SLC12A1Q13621 1099 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 GAB4Q2WGN9 574 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 KBTBD12Q3ZCT8 623 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 HSF5Q4G112 596 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-224ENST00000641711 TMEM196Q5HYL7 178 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 LGSNQ5TDP6 509 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 FAM72AQ5TYM5 149 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 FYB2Q5VWT5 728 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 NADSYN1Q6IA69 706 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 FAM72DQ6L9T8 149 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 ZNF449Q6P9G9 518 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 UNC5AQ6ZN44 842 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 SH2D5Q6ZV89 423 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 FAM72BQ86X60 149 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 KLHDC8BQ8IXV7 354 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.42□□□□□ -0.74
PHGDH-224ENST00000641711 BANPQ8N9N5 519 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 PJA1Q8NG27 643 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 GSDMBQ8TAX9 411 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 KCNV2Q8TDN2 545 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 FAM3CQ92520 227 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 TMA16Q96EY4 203 aaKnown RBP10.42□□□□□ -0.74
PHGDH-224ENST00000641711 VAT1Q99536 393 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 P2RY13Q9BPV8 354 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 PLCD4Q9BRC7 762 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 NAT9Q9BTE0 207 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 KDM4CQ9H3R0 1056 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 MFSD1Q9H3U5 465 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 ACTR5Q9H9F9 607 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-224ENST00000641711 COX16Q9P0S2 106 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 DEC1Q9P2X7 70 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 PPARGC1AQ9UBK2 798 aaKnown RBP10.42□□□□□ -0.74
PHGDH-224ENST00000641711 TRHDEQ9UKU6 1024 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 CA14Q9ULX7 337 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 VCANP13611 3396 aa10.42□□□□□ -0.74
PHGDH-224ENST00000641711 CXorf51AA0A1B0GTR3 108 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 OTOL1A6NHN0 477 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-224ENST00000641711 SDR42E2A6NKP2 422 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 CCT8L1PA6NM43 557 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 ERI2A8K979 691 aaKnown RBP10.41□□□□□ -0.74
PHGDH-224ENST00000641711 PRR33A8MZF0 331 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 SPAG7O75391 227 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 CLDN11O75508 207 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 SUN1O94901 812 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 FSBPO95073 299 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 MT-ND3P03897 115 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 APODP05090 189 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 KRT4P19013 534 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 AOC1P19801 751 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 PTPN3P26045 913 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 HOXC13P31276 330 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 SLC6A4P31645 630 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 FOXN2P32314 431 aa10.41□□□□□ -0.74
PHGDH-224ENST00000641711 RPA3P35244 121 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-224ENST00000641711 GRIA2P42262 883 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms