RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 RNF43Q68DV7 783 aa12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 TMC7Q7Z402 723 aa12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 CLEC14AQ86T13 490 aa12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 ZNF354CQ86Y25 554 aa12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 ACVR1CQ8NER5 493 aa12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 PPHLN1Q8NEY8 458 aaKnown RBP12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 OR13J1Q8NGT2 312 aa12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 HERVK_113Q902F9 699 aa12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 VPS39Q96JC1 886 aa12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 GPR22Q99680 433 aa12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 PRKD2Q9BZL6 878 aa12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 SNX15Q9NRS6 342 aa12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 IARS2Q9NSE4 1012 aaKnown RBP12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 CPQQ9Y646 472 aa12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 GBF1Q92538 1859 aa12.66□□□□□ -0.38
CACNA1A-219ENST00000635917 PRRC2BQ5JSZ5 2229 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 CCDC78A2IDD5 438 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 C2orf71A6NGG8 1288 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 CCT8L1PA6NM43 557 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 HIDE1A8MVS5 230 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 LDB2O43679 373 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 TSPAN3O60637 253 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 VAPBO95292 243 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 AHSGP02765 367 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 ARF5P84085 180 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 CYP4F8P98187 520 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 ITKQ08881 620 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 ZNF177Q13360 481 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 RFTN1Q14699 578 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 FSCBQ5H9T9 825 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 PPM1JQ5JR12 505 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 KYAT3Q6YP21 454 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 ZNF783Q6ZMS7 281 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 CMC1Q7Z7K0 106 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 MRPL43Q8N983 215 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 KREMEN2Q8NCW0 462 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 ARMC2Q8NEN0 867 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 SPPL3Q8TCT6 385 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 FEM1CQ96JP0 617 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 DDX50Q9BQ39 737 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 MECRQ9BV79 373 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 KDM4CQ9H3R0 1056 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 RHOJQ9H4E5 214 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 ALG13Q9NP73 1137 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 NSMCE4AQ9NXX6 385 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 DNMT3BQ9UBC3 853 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 GGT7Q9UJ14 662 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 ARL2BPQ9Y2Y0 163 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 ATG2AQ2TAZ0 1938 aa12.65□□□□□ -0.38
CACNA1A-219ENST00000635917 HEATR9A2RTY3 570 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 BIRC5O15392 142 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 PLIN3O60664 434 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 GLRA3O75311 464 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 C1RP00736 705 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 BPGMP07738 259 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 RHOCP08134 193 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 BGNP21810 368 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 GMPRP36959 345 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 EPHA5P54756 1037 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 ACVR1Q04771 509 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 CAMK1Q14012 370 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 ZNF235Q14590 738 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 CYTH1Q15438 398 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 SEPT7Q16181 437 aaKnown RBP12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 TSTD2Q5T7W7 516 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 IL31Q6EBC2 164 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 PSRC1Q6PGN9 363 aaPredicted RBP12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 CCDC149Q6ZUS6 474 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 HTR3DQ70Z44 454 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 TRPM8Q7Z2W7 1104 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 DENND6AQ8IWF6 608 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 SLC25A41Q8N5S1 370 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 CCDC63Q8NA47 563 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 C2CD4AQ8NCU7 369 aaPredicted RBP12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 PHOSPHO2Q8TCD6 241 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 WFDC5Q8TCV5 224 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 C10orf82Q8WW14 230 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 RMDN2Q96LZ7 410 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 TCF25Q9BQ70 676 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 TRPC7Q9HCX4 862 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 ABCF3Q9NUQ8 709 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 TXNDC16Q9P2K2 825 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 UBA2Q9UBT2 640 aaPredicted RBP12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 SEPT3Q9UH03 358 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 DCDC2Q9UHG0 476 aa12.65□□□□□ -0.39
CACNA1A-219ENST00000635917 TIMM44O43615 452 aa12.64□□□□□ -0.39
CACNA1A-219ENST00000635917 PRLP01236 227 aa12.64□□□□□ -0.39
CACNA1A-219ENST00000635917 LRG1P02750 347 aa12.64□□□□□ -0.39
CACNA1A-219ENST00000635917 PROCP04070 461 aa12.64□□□□□ -0.39
CACNA1A-219ENST00000635917 HSPA1AP0DMV8 641 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-219ENST00000635917 HSPA1BP0DMV9 641 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-219ENST00000635917 HLA-DPA1P20036 260 aa12.64□□□□□ -0.39
CACNA1A-219ENST00000635917 TYK2P29597 1187 aa12.64□□□□□ -0.39
CACNA1A-219ENST00000635917 CCR2P41597 374 aa12.64□□□□□ -0.39
CACNA1A-219ENST00000635917 ABCG1P45844 678 aa12.64□□□□□ -0.39
CACNA1A-219ENST00000635917 SERPINB8P50452 374 aa12.64□□□□□ -0.39
CACNA1A-219ENST00000635917 CLCN4P51793 760 aa12.64□□□□□ -0.39
CACNA1A-219ENST00000635917 OXCT1P55809 520 aa12.64□□□□□ -0.39
CACNA1A-219ENST00000635917 PDE1BQ01064 536 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms