RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 PCDHA3Q9Y5H8 950 aa13.31□□□□□ -0.28
SYNGAP1-208ENST00000629380 SALL1Q9NSC2 1324 aa13.31□□□□□ -0.28
SYNGAP1-208ENST00000629380 IL1R1P14778 569 aa13.31□□□□□ -0.28
SYNGAP1-208ENST00000629380 DSELQ8IZU8 1212 aa13.31□□□□□ -0.28
SYNGAP1-208ENST00000629380 HTR3CQ8WXA8 447 aa13.31□□□□□ -0.28
SYNGAP1-208ENST00000629380 ZKSCAN4Q969J2 545 aaPredicted RBP13.31□□□□□ -0.28
SYNGAP1-208ENST00000629380 CDHR5Q9HBB8 845 aa13.31□□□□□ -0.28
SYNGAP1-208ENST00000629380 ZMYM5Q9UJ78 669 aa13.31□□□□□ -0.28
SYNGAP1-208ENST00000629380 L1RE1Q9UN81 338 aa13.31□□□□□ -0.28
SYNGAP1-208ENST00000629380 RTTNQ86VV8 2226 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 TNK2Q07912 1038 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 TMPRSS11AQ6ZMR5 421 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 SPOCD1Q6ZMY3 1216 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 SSR3Q9UNL2 185 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 CNTNAP5Q8WYK1 1306 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 KIAA0100Q14667 2235 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 TMCC2O75069 709 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 PGK1P00558 417 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 RLN1P04808 185 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 H2AFXP16104 143 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 KLHL35Q6PF15 583 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 JAZF1Q86VZ6 243 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 COLGALT1Q8NBJ5 622 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 KAT2BQ92831 832 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 DGCR6LQ9BY27 220 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 ARMCX1Q9P291 453 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 XPR1Q9UBH6 696 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 SLC12A4Q9UP95 1085 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 CLUHO75153 1309 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 PLK4O00444 970 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 PLOD3O60568 738 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 RAP1GAPP47736 663 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 EMC1Q8N766 993 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 KCNS3Q9BQ31 491 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 TIMMDC1Q9NPL8 285 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 MRPS33Q9Y291 106 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 RGSL1A5PLK6 1076 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 IDO1P14902 403 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 PTPN11Q06124 597 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 ABRQ12979 859 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 TRAPPC5Q8IUR0 188 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 SIX5Q8N196 739 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 XKRYO14609 159 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 TMC8Q8IU68 726 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 PHF21BQ96EK2 531 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 RSPH9Q9H1X1 276 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 PCDHB5Q9Y5E4 795 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 RICTORQ6R327 1708 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 OR5F1O95221 314 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 PAEPP09466 180 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 GLRA4Q5JXX5 417 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 FBXL19Q6PCT2 694 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 TMEM176AQ96HP8 235 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 OMDQ99983 421 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 MRPL57Q9BQC6 102 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 DDX20Q9UHI6 824 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 LOC110117498-PIK3R3F6TDL0 507 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 JCHAINP01591 159 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 TKTL1P51854 596 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 PIK3R3Q92569 461 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 HGH1Q9BTY7 390 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 MORF4L1Q9UBU8 362 aa13.3□□□□□ -0.28
SYNGAP1-208ENST00000629380 TRAV19A0A0A6YYK7 116 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 UGT2B17O75795 530 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 TUBP50607 506 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 CCR3P51677 355 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 STK4Q13043 487 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 PDLIM2Q96JY6 352 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 AIFM2Q9BRQ8 373 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 RHOBTB2Q9BYZ6 727 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 UPB1Q9UBR1 384 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 RAPGEFL1Q9UHV5 662 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 CHADO15335 359 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 SEC24CP53992 1094 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 GRIP2Q9C0E4 1043 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 GPALPP1Q8IXQ4 340 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 TC2NQ8N9U0 490 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 CAPSLQ8WWF8 208 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 ATP13A3Q9H7F0 1226 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 C15orf41Q9Y2V0 281 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 ZNF780BQ9Y6R6 833 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 METTL21EPA6NDL7 271 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 ZNF208O43345 1280 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 IFNA16P05015 189 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 KLK7P49862 253 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 FAXCQ5TGI0 409 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 REXO1L1PQ8IX06 675 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 ZHX1-C8orf76Q96EF9 292 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 CST11Q9H112 138 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 TMEM39AQ9NV64 488 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 GMPPBQ9Y5P6 360 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 ESPL1Q14674 2120 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 RSL1D1O76021 490 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 SLC6A2P23975 617 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 SNRPD1P62314 119 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 BMT2Q1RMZ1 405 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
SYNGAP1-208ENST00000629380 NKAPQ8N5F7 415 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms