RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 AP3B1O00203 1094 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 PRPF4O43172 522 aaKnown RBP eCLIP12.62□□□□□ -0.393e-9■■■■■ 30.9
SYNGAP1-207ENST00000628646 TMEM63AO94886 807 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 ACVRL1P37023 503 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 ASB16Q96NS5 453 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 P2RY13Q9BPV8 354 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 FCF1Q9Y324 198 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 ZDBF2Q9HCK1 2354 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 SAT1P21673 171 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 GEMP55040 296 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 TPRG1Q6ZUI0 275 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 TRPM8Q7Z2W7 1104 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 LPCAT1Q8NF37 534 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 GSDMBQ8TAX9 411 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 OSCP1Q8WVF1 389 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 MAGEB18Q96M61 343 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 CCDC68Q9H2F9 335 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 TRABDQ9H4I3 376 aa12.62□□□□□ -0.39
SYNGAP1-207ENST00000628646 ZNF638Q14966 1978 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 GSTA1P08263 222 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 TSHRP16473 764 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 RPL22P35268 128 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 SOX9P48436 509 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 SF3A3Q12874 501 aaKnown RBP eCLIP12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 THOC5Q13769 683 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 PUS10Q3MIT2 529 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 OMDQ99983 421 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 ADAM33Q9BZ11 813 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 PITPNM3Q9BZ71 974 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 PLAC1Q9HBJ0 212 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 XAB2Q9HCS7 855 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 HACD1B0YJ81 288 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 MGRN1O60291 552 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 PMLP29590 882 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 PRAMEP78395 509 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 FAM182AQ5T1J6 154 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 FBXL19Q6PCT2 694 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 RGS9BPQ6ZS82 235 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 C3orf62Q6ZUJ4 267 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 LRRC49Q8IUZ0 686 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 RMDN2Q96LZ7 410 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 IGSF9Q9P2J2 1179 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 LZTS3O60299 673 aaPredicted RBP12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 TULP3O75386 442 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 FDFT1P37268 417 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 SFSWAPQ12872 951 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 LBRQ14739 615 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 NAPEPLDQ6IQ20 393 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 FAM124AQ86V42 546 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 MFSD6LQ8IWD5 586 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 P2RY11Q96G91 374 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 FICDQ9BVA6 458 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 HEBP1Q9NRV9 189 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 KLC4Q9NSK0 619 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 AAR2Q9Y312 384 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 TSC2P49815 1807 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 FRMPD3Q5JV73 1810 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 BRCA2P51587 3418 aa12.61□□□□□ -0.39
SYNGAP1-207ENST00000628646 ECT2LQ008S8 904 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 EFTUD2Q15029 972 aaKnown RBP eCLIP12.6□□□□□ -0.392e-7■■■■□ 22.5
SYNGAP1-207ENST00000628646 CYB5D1Q6P9G0 228 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 SH2D5Q6ZV89 423 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 IGDCC3Q8IVU1 814 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 PIH1D1Q9NWS0 290 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 MFHAS1Q9Y4C4 1052 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 A0A0D9SEW6 157 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 PFDN6O15212 129 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 PSMD3O43242 534 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 USP12O75317 370 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 GLP2RO95838 553 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 KLKB1P03952 638 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 SERPINA4P29622 427 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 CD86P42081 329 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 DLG2Q15700 870 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 ICE2Q659A1 982 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 SETD3Q86TU7 594 aaPredicted RBP12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 TTC7BQ86TV6 843 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 FITM2Q8N6M3 262 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 ZNF513Q8N8E2 541 aaPredicted RBP12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 WFIKKN2Q8TEU8 576 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 C1orf74Q96LT6 269 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 DTLQ9NZJ0 730 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 FETUBQ9UGM5 382 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 EVLQ9UI08 416 aaPredicted RBP12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 TTC28Q96AY4 2481 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 A0A1W2PPM1 405 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 ILVBLA1L0T0 632 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 MZF1P28698 734 aaPredicted RBP12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 NDST2P52849 883 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 SWT1Q5T5J6 900 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 C6orf163Q5TEZ5 329 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 ANKRD20A3Q5VUR7 823 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 HTR3DQ70Z44 454 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 TMC8Q8IU68 726 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 ANKMY2Q8IV38 441 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 OR8D1Q8WZ84 308 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 SPOCK2Q92563 424 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 TRHDEQ9UKU6 1024 aa12.6□□□□□ -0.39
SYNGAP1-207ENST00000628646 NCKAP1Q9Y2A7 1128 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms