RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 DNM1LO00429 736 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 KRT16P08779 473 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 CD48P09326 243 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 TSPAN8P19075 237 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 SKIV2L2P42285 1042 aaKnown RBP9.33□□□□□ -0.92
GGA3-223ENST00000621870 CYTH1Q15438 398 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 C17orf99Q6UX52 265 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 MON1BQ7L1V2 547 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 FAM9CQ8IZT9 166 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 CYP4X1Q8N118 509 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 OR56A4Q8NGH8 313 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 OR10G6Q8NH81 332 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 SPATA22Q8NHS9 363 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 STAG3L4Q8TBR4 150 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 MAGEC3Q8TD91 643 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 FNIP1Q8TF40 1166 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 STK32AQ8WU08 396 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 COL26A1Q96A83 441 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 SUSD3Q96L08 255 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 PPP1R10Q96QC0 940 aaKnown RBP9.33□□□□□ -0.92
GGA3-223ENST00000621870 EBNA1BP2Q99848 306 aaKnown RBP9.33□□□□□ -0.92
GGA3-223ENST00000621870 ZFYVE1Q9HBF4 777 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 TCF7L2Q9NQB0 619 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 MRPS17Q9Y2R5 130 aaKnown RBP9.33□□□□□ -0.92
GGA3-223ENST00000621870 RAI2Q9Y5P3 530 aa9.33□□□□□ -0.92
GGA3-223ENST00000621870 ZFP37Q9Y6Q3 630 aaPredicted RBP9.33□□□□□ -0.92
GGA3-223ENST00000621870 SLCO1B7G3V0H7 640 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 H3BQF6 201 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 SCAMP1O15126 338 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 ZW10O43264 779 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 HCRTO43612 131 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 RGS20O76081 388 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 FGF18O76093 207 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 SERPINE1P05121 402 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 MC4RP32245 332 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 GCKP35557 465 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 PBX1P40424 430 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 DGKGP49619 791 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 AIF1P55008 147 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 SCARA3Q6AZY7 606 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 RHBDF2Q6PJF5 856 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 POTEHQ6S545 545 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 SLC41A1Q8IVJ1 513 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 GALNT4Q8N4A0 578 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 POF1BQ8WVV4 589 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 SELENOMQ8WWX9 145 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 IRGQQ8WZA9 623 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 MTFMTQ96DP5 389 aaKnown RBP9.32□□□□□ -0.92
GGA3-223ENST00000621870 CLIP3Q96DZ5 547 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 VMP1Q96GC9 406 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 MYO19Q96H55 970 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 CNDP1Q96KN2 507 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 VPS45Q9NRW7 570 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 POLG2Q9UHN1 485 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 CCT8L1PA6NM43 557 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 TULP2O00295 520 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 PIGNO95427 931 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 L1CAMP32004 1257 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 GPD2P43304 727 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 NRIP1P48552 1158 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 CAP1Q01518 475 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 SEMG2Q02383 582 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 DSC2Q02487 901 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 FLOT2Q14254 428 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 NOMO1Q15155 1222 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 SYPL2Q5VXT5 272 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 CLEC20AQ6ZU45 233 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 SPATA6LQ8N4H0 392 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 NKAPQ8N5F7 415 aaKnown RBP9.32□□□□□ -0.92
GGA3-223ENST00000621870 OR9Q1Q8NGQ5 310 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 CAVIN3Q969G5 261 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 PCYT2Q99447 389 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 WRAP53Q9BUR4 548 aaKnown RBP9.32□□□□□ -0.92
GGA3-223ENST00000621870 ADNPQ9H2P0 1102 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 KCND1Q9NSA2 647 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 TEKT2Q9UIF3 430 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 HBS1LQ9Y450 684 aaKnown RBP9.32□□□□□ -0.92
GGA3-223ENST00000621870 MYADML2A6NDP7 307 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 CCL22O00626 93 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 FFAR3O14843 346 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 TM9SF1O15321 606 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 GPR42O15529 346 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 THRAP10827 490 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 CDH2P19022 906 aaPredicted RBP9.32□□□□□ -0.92
GGA3-223ENST00000621870 GDI1P31150 447 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 PTPN9P43378 593 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 PEX5P50542 639 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 ANXA11P50995 505 aaKnown RBP9.32□□□□□ -0.92
GGA3-223ENST00000621870 TRIP4Q15650 581 aaPredicted RBP9.32□□□□□ -0.92
GGA3-223ENST00000621870 PARP15Q460N3 678 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 SNAP47Q5SQN1 464 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 SH3PXD2AQ5TCZ1 1133 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 TPGS2Q68CL5 300 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 ARHGAP17Q68EM7 881 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 AFTPHQ6ULP2 937 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 HORMAD1Q86X24 394 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 ZNF280BQ86YH2 543 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 COLGALT2Q8IYK4 626 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 FUKQ8N0W3 1084 aa9.32□□□□□ -0.92
GGA3-223ENST00000621870 AGGF1Q8N302 714 aaeCLIP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms