RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 IFI35P80217 286 aaPredicted RBP18.81■□□□□ 0.6
CIRBP-245ENST00000621399 OTUD4Q01804 1114 aaKnown RBP18.81■□□□□ 0.6
CIRBP-245ENST00000621399 CCDC15Q0P6D6 951 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 XRCC4Q13426 336 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 PRKD1Q15139 912 aaPredicted RBP18.81■□□□□ 0.6
CIRBP-245ENST00000621399 NOMO1Q15155 1222 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 ZNF805Q5CZA5 627 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 ERN2Q76MJ5 926 aaKnown RBP18.81■□□□□ 0.6
CIRBP-245ENST00000621399 TMEFF1Q8IYR6 380 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 DEFB119Q8N690 84 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 VOPP1Q96AW1 172 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 ZNF419Q96HQ0 510 aaPredicted RBP18.81■□□□□ 0.6
CIRBP-245ENST00000621399 KLHL32Q96NJ5 620 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 TUBGCP5Q96RT8 1024 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 MGME1Q9BQP7 344 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 HDAC8Q9BY41 377 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 SCUBE2Q9NQ36 999 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 SMG5Q9UPR3 1016 aaKnown RBP18.81■□□□□ 0.6
CIRBP-245ENST00000621399 TTLL3Q9Y4R7 772 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 HACD1B0YJ81 288 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 H7C0C1 242 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 SLC7A4O43246 635 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 PIGNO95427 931 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 ATP5OP48047 213 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 EIF3EP60228 445 aaKnown RBP18.8■□□□□ 0.6
CIRBP-245ENST00000621399 AP1S1P61966 158 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 ZBTB17Q13105 803 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 FBXL19Q6PCT2 694 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.8■□□□□ 0.6
CIRBP-245ENST00000621399 TTC13Q8NBP0 860 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 OR14C36Q8NHC7 312 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 NKD2Q969F2 451 aaPredicted RBP18.8■□□□□ 0.6
CIRBP-245ENST00000621399 ZNF641Q96N77 438 aaPredicted RBP18.8■□□□□ 0.6
CIRBP-245ENST00000621399 NUDCD1Q96RS6 583 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 PHOX2BQ99453 314 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 IL12RB2Q99665 862 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 FAM118BQ9BPY3 351 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 POLR1EQ9GZS1 481 aaKnown RBP18.8■□□□□ 0.6
CIRBP-245ENST00000621399 ATP13A3Q9H7F0 1226 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 AMACRQ9UHK6 382 aa18.8■□□□□ 0.6
CIRBP-245ENST00000621399 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-245ENST00000621399 TCRBV7S2A1N4TA0A589 114 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 FAM47DPA6NHR8 397 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 LRRC72A6NJI9 287 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 C16orf96A6NNT2 1141 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 PROB1E7EW31 1015 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 MTSS1O43312 755 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 SEMA4FO95754 770 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 LMNAP02545 664 aaKnown RBP18.79■□□□□ 0.6
CIRBP-245ENST00000621399 HLA-DQB2P05538 268 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 CR2P20023 1033 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 SERPINA4P29622 427 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 CXCR5P32302 372 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 DHPSP49366 369 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-245ENST00000621399 NEK3P51956 506 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 BCL2L1Q07817 233 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 KLF1Q13351 362 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-245ENST00000621399 SLC45A4Q5BKX6 768 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 RALGPS1Q5JS13 557 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 SPDYCQ5MJ68 293 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 CFAP58Q5T655 872 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 PIP5KL1Q5T9C9 394 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 AGBL4Q5VU57 503 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 PMS2CLQ68D20 193 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 NCEH1Q6PIU2 408 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 SLC13A5Q86YT5 568 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-245ENST00000621399 CAMK1DQ8IU85 385 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 PAF1Q8N7H5 531 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 SUMF1Q8NBK3 374 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 FAM131CQ96AQ9 280 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 QKIQ96PU8 341 aaKnown RBP eCLIP18.79■□□□□ 0.6
CIRBP-245ENST00000621399 SEMA3CQ99985 751 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 CEP41Q9BYV8 373 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 SUV39H2Q9H5I1 410 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 NOD2Q9HC29 1040 aa18.79■□□□□ 0.6
CIRBP-245ENST00000621399 CEP104O60308 925 aa18.78■□□□□ 0.6
CIRBP-245ENST00000621399 RBP3P10745 1247 aa18.78■□□□□ 0.6
CIRBP-245ENST00000621399 CES1P23141 567 aa18.78■□□□□ 0.6
CIRBP-245ENST00000621399 ADPRHP54922 357 aa18.78■□□□□ 0.6
CIRBP-245ENST00000621399 GNG11P61952 73 aa18.78■□□□□ 0.6
CIRBP-245ENST00000621399 DARS2Q6PI48 645 aaKnown RBP18.78■□□□□ 0.6
CIRBP-245ENST00000621399 PARS2Q7L3T8 475 aaKnown RBP18.78■□□□□ 0.6
CIRBP-245ENST00000621399 ARMCX6Q7L4S7 300 aa18.78■□□□□ 0.6
CIRBP-245ENST00000621399 ADAT2Q7Z6V5 191 aaKnown RBP18.78■□□□□ 0.6
CIRBP-245ENST00000621399 CDKL3Q8IVW4 592 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-245ENST00000621399 CNTD1Q8N815 330 aa18.78■□□□□ 0.6
CIRBP-245ENST00000621399 CADM4Q8NFZ8 388 aa18.78■□□□□ 0.6
CIRBP-245ENST00000621399 HTR3CQ8WXA8 447 aa18.78■□□□□ 0.6
CIRBP-245ENST00000621399 FOXJ1Q92949 421 aa18.78■□□□□ 0.6
CIRBP-245ENST00000621399 AGAP3Q96P47 875 aa18.78■□□□□ 0.6
CIRBP-245ENST00000621399 FERMT1Q9BQL6 677 aa18.78■□□□□ 0.6
CIRBP-245ENST00000621399 DKK3Q9UBP4 350 aa18.78■□□□□ 0.6
CIRBP-245ENST00000621399 ATP8A1Q9Y2Q0 1164 aa18.78■□□□□ 0.6
CIRBP-245ENST00000621399 TBC1D3DA0A087WVF3 549 aa18.77■□□□□ 0.6
CIRBP-245ENST00000621399 TBC1D3IA0A087WXS9 549 aa18.77■□□□□ 0.6
CIRBP-245ENST00000621399 TBC1D3EA0A087X179 549 aa18.77■□□□□ 0.6
CIRBP-245ENST00000621399 TBC1D3KA0A087X1G2 549 aa18.77■□□□□ 0.6
CIRBP-245ENST00000621399 TBC1D3FA6NER0 549 aaPredicted RBP18.77■□□□□ 0.6
CIRBP-245ENST00000621399 TBC1D3LB9A6J9 549 aa18.77■□□□□ 0.6
CIRBP-245ENST00000621399 PLRG1O43660 514 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms