RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 CARNS1A5YM72 827 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 PTPN2P17706 415 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 SERPINB4P48594 390 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 ERVFC1P60507 584 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 PDPK2PQ6A1A2 396 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 DENND6AQ8IWF6 608 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 PLD4Q96BZ4 506 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 WDR83Q9BRX9 315 aaKnown RBP15.9■□□□□ 0.14
CPSF1-213ENST00000620219 SLC25A13Q9UJS0 675 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 PRR23AA6NEV1 266 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 ERFP50548 548 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 EML3Q32P44 896 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 SMYD5Q6GMV2 418 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 MRNIPQ6NTE8 343 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 SLC41A1Q8IVJ1 513 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 WDR75Q8IWA0 830 aaKnown RBP15.9■□□□□ 0.14
CPSF1-213ENST00000620219 ATP6V1E2Q96A05 226 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 MTBPQ96DY7 904 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 APOPT1Q96IL0 206 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 MAFKO60675 156 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 BAIAP3O94812 1187 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 RHOBTB1O94844 696 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 MLNP12872 115 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 CSKP41240 450 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 BCL2L1Q07817 233 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 ZNF778Q96MU6 729 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 OLFM3Q96PB7 478 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 LGALS13Q9UHV8 139 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 ARL2BPQ9Y2Y0 163 aa15.9■□□□□ 0.14
CPSF1-213ENST00000620219 CCT8L1PA6NM43 557 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 CRTAMO95727 393 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 BMPR1AP36894 532 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 CD151P48509 253 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 SERPINB8P50452 374 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 PLK1P53350 603 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 DLG2Q15700 870 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 ZNF75CPQ92670 426 aaPredicted RBP15.89■□□□□ 0.13
CPSF1-213ENST00000620219 GPAMQ9HCL2 828 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 UBOX5O94941 541 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 CTSAP10619 480 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 MPP1Q00013 466 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 MTA1Q13330 715 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 PTPRCAPQ14761 206 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 LRRC73Q5JTD7 316 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 PPP2R2DQ66LE6 453 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 ADGRD1Q6QNK2 874 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 ZSCAN18Q8TBC5 510 aaPredicted RBP15.89■□□□□ 0.13
CPSF1-213ENST00000620219 DCAKDQ8WVC6 231 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 CPNE1Q99829 537 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 MAGEH1Q9H213 219 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 FAM96AQ9H5X1 160 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 SLC2A6Q9UGQ3 507 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 DPP7Q9UHL4 492 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 FAM50BQ9Y247 325 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 OR51F1A6NGY5 319 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 MNAT1P51948 309 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 KPNA2P52292 529 aaKnown RBP15.89■□□□□ 0.13
CPSF1-213ENST00000620219 IL10RBQ08334 325 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 ARHGEF7Q14155 803 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 BBS7Q8IWZ6 715 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 TBATAQ96M53 351 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 LRRC37BQ96QE4 947 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 ABCG8Q9H221 673 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 ABCB8Q9NUT2 735 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 ACOT9Q9Y305 439 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 PSAT1Q9Y617 370 aa15.89■□□□□ 0.13
CPSF1-213ENST00000620219 ZNF487B1APH4 448 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 SNX3O60493 162 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 SRP72O76094 671 aaKnown RBP15.88■□□□□ 0.13
CPSF1-213ENST00000620219 AKT1P31749 480 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 MAPKAPK2P49137 400 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 ITGA9Q13797 1035 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 PKN3Q6P5Z2 889 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 MLPHQ9BV36 600 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-213ENST00000620219 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-213ENST00000620219 PLA2G4CQ9UP65 541 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 GLRA3O75311 464 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 GFAPP14136 432 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 EPCAMP16422 314 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 GCAP28676 217 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 MZF1P28698 734 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-213ENST00000620219 HTR7P34969 479 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 NRIP1P48552 1158 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 CORO7P57737 925 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 CCDC6Q16204 474 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 ARMC12Q5T9G4 340 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 MCUR1Q96AQ8 359 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 PLCD4Q9BRC7 762 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 UTP6Q9NYH9 597 aaKnown RBP15.88■□□□□ 0.13
CPSF1-213ENST00000620219 CRLS1Q9UJA2 301 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 FBXO5Q9UKT4 447 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 WNT6Q9Y6F9 365 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 C2orf71A6NGG8 1288 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 NCF1BA6NI72 391 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-213ENST00000620219 NCF1CA8MVU1 366 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-213ENST00000620219 NCF1P14598 390 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-213ENST00000620219 TAC1P20366 129 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 RPL34P49207 117 aaKnown RBP15.88■□□□□ 0.13
CPSF1-213ENST00000620219 ASPHQ12797 758 aa15.88■□□□□ 0.13
CPSF1-213ENST00000620219 GRTP1Q5TC63 336 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms