RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 LACRTQ9GZZ8 138 aa16.96■□□□□ 0.31
CBWD3-211ENST00000615061 TTC24A2A3L6 582 aaPredicted RBP16.95■□□□□ 0.3
CBWD3-211ENST00000615061 C3orf70A6NLC5 250 aaPredicted RBP16.95■□□□□ 0.3
CBWD3-211ENST00000615061 C16orf96A6NNT2 1141 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 ARHGAP33O14559 1287 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 SPOPO43791 374 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 SERPINB6P35237 376 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 ABL2P42684 1182 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 SLC1A1P43005 524 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 CCR5P51681 352 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 NEK3P51956 506 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 GBE1Q04446 702 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 GRIK2Q13002 908 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 ZNF805Q5CZA5 627 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 MAP7D3Q8IWC1 876 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 ATPAF2Q8N5M1 289 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 KLK6Q92876 244 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 NSMCE3Q96MG7 304 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 CINPQ9BW66 212 aaPredicted RBP16.95■□□□□ 0.3
CBWD3-211ENST00000615061 KDM4CQ9H3R0 1056 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 LUC7LQ9NQ29 371 aaKnown RBP16.95■□□□□ 0.3
CBWD3-211ENST00000615061 TMEM9BQ9NQ34 198 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 GGT7Q9UJ14 662 aa16.95■□□□□ 0.3
CBWD3-211ENST00000615061 A0A0A6YYK5 440 aaPredicted RBP16.94■□□□□ 0.3
CBWD3-211ENST00000615061 A0A1B0GVT2 93 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 DCDC2BA2VCK2 349 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 SLC30A4O14863 429 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 LATO43561 262 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 IPO7O95373 1038 aaKnown RBP16.94■□□□□ 0.3
CBWD3-211ENST00000615061 KRT1P04264 644 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 LBRQ14739 615 aaKnown RBP16.94■□□□□ 0.3
CBWD3-211ENST00000615061 PAFAH1B3Q15102 231 aaKnown RBP16.94■□□□□ 0.3
CBWD3-211ENST00000615061 FBXL19Q6PCT2 694 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 GDPD4Q6W3E5 623 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 RHOT1Q8IXI2 618 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 RNF25Q96BH1 459 aaPredicted RBP16.94■□□□□ 0.3
CBWD3-211ENST00000615061 LRIG1Q96JA1 1093 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 RNF157Q96PX1 679 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 ITM2BQ9Y287 266 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 LRRK1Q38SD2 2015 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 A0A1W2PQU0 124 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 SPINT1O43278 529 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 RNGTTO60942 597 aaKnown RBP16.94■□□□□ 0.3
CBWD3-211ENST00000615061 ITIH2P19823 946 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 MARCKSL1P49006 195 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 LIMK1P53667 647 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 SLC10A2Q12908 348 aaPredicted RBP16.94■□□□□ 0.3
CBWD3-211ENST00000615061 LLGL1Q15334 1064 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 UAP1L1Q3KQV9 507 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 TMCO4Q5TGY1 634 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 LRRC38Q5VT99 294 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 SEL1L3Q68CR1 1132 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 MINDY1Q8N5J2 469 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 TPCN2Q8NHX9 752 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 PREBQ9HCU5 417 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 ZFR2Q9UPR6 939 aaKnown RBP16.94■□□□□ 0.3
CBWD3-211ENST00000615061 CA5BQ9Y2D0 317 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 FADS3Q9Y5Q0 445 aa16.94■□□□□ 0.3
CBWD3-211ENST00000615061 PCDH8O95206 1070 aa16.93■□□□□ 0.3
CBWD3-211ENST00000615061 WNT1P04628 370 aa16.93■□□□□ 0.3
CBWD3-211ENST00000615061 PRLRP16471 622 aa16.93■□□□□ 0.3
CBWD3-211ENST00000615061 AFF3P51826 1226 aaKnown RBP16.93■□□□□ 0.3
CBWD3-211ENST00000615061 VAV2P52735 878 aa16.93■□□□□ 0.3
CBWD3-211ENST00000615061 ATXN3P54252 364 aaPredicted RBP16.93■□□□□ 0.3
CBWD3-211ENST00000615061 RAD51Q06609 339 aa16.93■□□□□ 0.3
CBWD3-211ENST00000615061 PUM1Q14671 1186 aaKnown RBP eCLIP16.93■□□□□ 0.3
CBWD3-211ENST00000615061 TRIM69Q86WT6 500 aa16.93■□□□□ 0.3
CBWD3-211ENST00000615061 CAMK1DQ8IU85 385 aa16.93■□□□□ 0.3
CBWD3-211ENST00000615061 PGBD5Q8N414 524 aa16.93■□□□□ 0.3
CBWD3-211ENST00000615061 PLD5Q8N7P1 536 aa16.93■□□□□ 0.3
CBWD3-211ENST00000615061 SERAC1Q96JX3 654 aa16.93■□□□□ 0.3
CBWD3-211ENST00000615061 MYOCQ99972 504 aa16.93■□□□□ 0.3
CBWD3-211ENST00000615061 OSBPL1AQ9BXW6 950 aa16.93■□□□□ 0.3
CBWD3-211ENST00000615061 TRIM10Q9UDY6 481 aa16.93■□□□□ 0.3
CBWD3-211ENST00000615061 TM4SF5O14894 197 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 GARSP41250 739 aaKnown RBP16.92■□□□□ 0.3
CBWD3-211ENST00000615061 SCNN1BP51168 640 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 MAXP61244 160 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 CCDC15Q0P6D6 951 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 GALNT2Q10471 571 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 RFTN1Q14699 578 aaPredicted RBP16.92■□□□□ 0.3
CBWD3-211ENST00000615061 KIF19Q2TAC6 998 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 FAM182AQ5T1J6 154 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 C11orf63Q6NUN7 778 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 MFSD7Q6UXD7 560 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 DAAM2Q86T65 1068 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 SRLQ86TD4 932 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 HORMAD1Q86X24 394 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 ZSWIM9Q86XI8 627 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 ZNF599Q96NL3 588 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 PSKH2Q96QS6 385 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 CPEB1Q9BZB8 566 aaKnown RBP16.92■□□□□ 0.3
CBWD3-211ENST00000615061 IL21RQ9HBE5 538 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 FZD3Q9NPG1 666 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 AASDHPPTQ9NRN7 309 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 DTLQ9NZJ0 730 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 SEPT3Q9UH03 358 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 TDRD6O60522 2096 aaKnown RBP16.92■□□□□ 0.3
CBWD3-211ENST00000615061 KCNK3O14649 394 aa16.92■□□□□ 0.3
CBWD3-211ENST00000615061 SLC31A1O15431 190 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms