RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 OAS1P00973 400 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 F11P03951 625 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 TSHRP16473 764 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ARNTP27540 789 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 HOXD9P28356 352 aaPredicted RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 ABL2P42684 1182 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ETV4P43268 484 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 NEK3P51956 506 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 SLC18A2Q05940 514 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 RING1Q06587 406 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 BST1Q10588 318 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CDH18Q13634 790 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 PCID2Q5JVF3 399 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 RABGAP1LQ5R372 815 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 TMEM240Q5SV17 173 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 AFMIDQ63HM1 303 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 STEAP4Q687X5 459 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ZNF449Q6P9G9 518 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CNSTQ6PJW8 725 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 LINC00523Q86TU6 105 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 APCDD1Q8J025 514 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 RYBPQ8N488 228 aaPredicted RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 KIF2BQ8N4N8 673 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 FITM2Q8N6M3 262 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 NAT16Q8N8M0 369 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 PDZD8Q8NEN9 1154 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 PPHLN1Q8NEY8 458 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 ARRDC2Q8TBH0 407 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ADAMTS19Q8TE59 1207 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 MRPS31Q92665 395 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 IMP4Q96G21 291 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 VPS39Q96JC1 886 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 SCYL1Q96KG9 808 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 TBATAQ96M53 351 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 OMDQ99983 421 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CINPQ9BW66 212 aaPredicted RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 TSSK1BQ9BXA7 367 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 SLC46A2Q9BY10 475 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 C20orf27Q9GZN8 174 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 TNKS2Q9H2K2 1166 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 FAM96AQ9H5X1 160 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 IL21Q9HBE4 155 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 SNX15Q9NRS6 342 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 KLHL14Q9P2G3 628 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 PPARGC1AQ9UBK2 798 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 UBA2Q9UBT2 640 aaPredicted RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 SOX13Q9UN79 622 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 PLLPQ9Y342 182 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 SH3BP1Q9Y3L3 701 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 HBS1LQ9Y450 684 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 INSL6Q9Y581 213 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CCT8L1PA6NM43 557 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ERI2A8K979 691 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 H3BNC9 293 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 GRM6O15303 877 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 INSIG1O15503 277 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 SMAD6O43541 496 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 ITM2AO43736 263 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 PRAMEF11O60813 436 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 EDF1O60869 148 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 C2P06681 752 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CTSAP10619 480 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 EPCAMP16422 314 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CTPS1P17812 591 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 RFC2P35250 354 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 SPRP35270 261 aaPredicted RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 ADRA1AP35348 466 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CSKP41240 450 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 SLC1A2P43004 574 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CCR10P46092 362 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 SERPINH1P50454 418 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 KPNA1P52294 538 aaPredicted RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 PRAMEP78395 509 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 IL10RBQ08334 325 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 PARP15Q460N3 678 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ACCSLQ4AC99 568 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 FASTKD1Q53R41 847 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 LRRC73Q5JTD7 316 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 RBM20Q5T481 1227 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 KDELC1Q6UW63 502 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 C6orf89Q6UWU4 347 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 MARK2Q7KZI7 788 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 TRPM8Q7Z2W7 1104 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 HERC6Q8IVU3 1022 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 C10orf107Q8IVU9 208 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ARID3BQ8IVW6 561 aaPredicted RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 CEP97Q8IW35 865 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 TCEAL8Q8IYN2 117 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CMTM8Q8IZV2 173 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ZNF276Q8N554 614 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 LPCAT1Q8NF37 534 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 SH3RF2Q8TEC5 729 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 KCTD4Q8WVF5 259 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 E2F7Q96AV8 911 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ALKBH8Q96BT7 664 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 PRR11Q96HE9 360 aaPredicted RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 ELMO2Q96JJ3 720 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 DNAJC1Q96KC8 554 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 ZFRQ96KR1 1074 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 RBBP8Q99708 897 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms