RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	CDO1	Q16878	200 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	INO80D	Q53TQ3	878 aa	Predicted RBP	11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	IGF2-AS	Q6U949	168 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	RBM43	Q6ZSC3	357 aa	Known RBP	11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	LSMEM2	Q8N112	164 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	CCDC185	Q8N715	623 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	C3orf20	Q8ND61	904 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	JOSD2	Q8TAC2	188 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	SLC30A5	Q8TAD4	765 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	FAM172A	Q8WUF8	416 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	GRAMD1A	Q96CP6	724 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	HIC2	Q96JB3	615 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	ZNF578	Q96N58	590 aa	Predicted RBP	11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	DEPDC7	Q96QD5	511 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	PCDHB18P	Q96TA0	734 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	C11orf70	Q9BRQ4	267 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	TM6SF2	Q9BZW4	377 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	VPS16	Q9H269	839 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	NOL6	Q9H6R4	1146 aa	Known RBP	11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	DKK3	Q9UBP4	350 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	DNAI1	Q9UI46	699 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	KLF15	Q9UIH9	416 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	SALL4	Q9UJQ4	1053 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	ACTL7A	Q9Y615	435 aa		11.3	□□□□□ -0.6
CBWD1-222	ENST00000613508	TCRBV5S1A1T	A0A578	114 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	FAM170A	A1A519	330 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	LRRC10B	A6NIK2	292 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	SIGLEC16	A6NMB1	481 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	KRIT1	O00522	736 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	TOR1B	O14657	336 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	AQP9	O43315	295 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	CALB1	P05937	261 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	UGT2B4	P06133	528 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	TPM2	P07951	284 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	GK	P32189	559 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	STAT1	P42224	750 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	NSF	P46459	744 aa	Known RBP	11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	LSS	P48449	732 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	KLK7	P49862	253 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	ZNF143	P52747	638 aa	Predicted RBP	11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	AIF1	P55008	147 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	YBEY	P58557	167 aa	Predicted RBP	11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	ERVPABLB-1	P60509	514 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	YPEL5	P62699	121 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	TLE3	Q04726	772 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	CLEC16A	Q2KHT3	1053 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	ZNF542P	Q5EBM4	170 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	TPRG1L	Q5T0D9	272 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	FKBP15	Q5T1M5	1219 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	GDPD4	Q6W3E5	623 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	KDM7A	Q6ZMT4	941 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	MON1B	Q7L1V2	547 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	TMC6	Q7Z403	805 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	SLFN11	Q7Z7L1	901 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	RTL3	Q8N8U3	475 aa	Known RBP	11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	HCAR2	Q8TDS4	363 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	BTN2A2	Q8WVV5	523 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	GDAP1L1	Q96MZ0	367 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	MAGEB5	Q9BZ81	275 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	TTYH3	Q9C0H2	523 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	CAAP1	Q9H8G2	361 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	ADAM22	Q9P0K1	906 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	PCDHB1	Q9Y5F3	818 aa		11.29	□□□□□ -0.6
CBWD1-222	ENST00000613508	WASH4P	A8MWX3	477 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	LMO7DN	F2Z398	122 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	NEMP1	O14524	444 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	ATXN7	O15265	892 aa	Predicted RBP	11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	NEBL	O76041	1014 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	TMCC1	O94876	653 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	JUND	P17535	347 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	GPD1	P21695	349 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	HTR7	P34969	479 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	EIF2B5	Q13144	721 aa	Known RBP	11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	PDE1C	Q14123	709 aa	Predicted RBP	11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	PTK2B	Q14289	1009 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	PARP15	Q460N3	678 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	PPP1R15B	Q5SWA1	713 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	WDR59	Q6PJI9	974 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	UMODL1-AS1	Q8N2C9	162 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	RYBP	Q8N488	228 aa	Predicted RBP	11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	ZNF248	Q8NDW4	579 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	OR6K2	Q8NGY2	324 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	TPCN2	Q8NHX9	752 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	IFI44	Q8TCB0	444 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	KLHL32	Q96NJ5	620 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	ERGIC2	Q96RQ1	377 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	BOC	Q9BWV1	1114 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	C1QTNF7	Q9BXJ2	289 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	CPEB1	Q9BZB8	566 aa	Known RBP	11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	POLR1B	Q9H9Y6	1135 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	NLRC4	Q9NPP4	1024 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	FANCL	Q9NW38	375 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	LIMA1	Q9UHB6	759 aa	Known RBP	11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	IPO11	Q9UI26	975 aa	Known RBP	11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	GGT7	Q9UJ14	662 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	ITM2B	Q9Y287	266 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	RAI2	Q9Y5P3	530 aa		11.28	□□□□□ -0.6
CBWD1-222	ENST00000613508	TEX51	A0A1B0GUA7	166 aa		11.27	□□□□□ -0.61
CBWD1-222	ENST00000613508	TSPAN11	A1L157	253 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms