RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 SGCGQ13326 291 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 ZNF423Q2M1K9 1284 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 ZFYVE27Q5T4F4 411 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 ATXN7L2Q5T6C5 722 aaPredicted RBP11.71□□□□□ -0.53
CCDC12-209ENST00000604164 TTC7BQ86TV6 843 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 DCP2Q8IU60 420 aaKnown RBP11.71□□□□□ -0.53
CCDC12-209ENST00000604164 NAXDQ8IW45 347 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 CCDC170Q8IYT3 715 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 KCTD6Q8NC69 237 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 DEFB124Q8NES8 71 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 OR6K2Q8NGY2 324 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 MRFAP1L1Q96HT8 127 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 BTBD6Q96KE9 485 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 CDC6Q99741 560 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 C1QTNF7Q9BXJ2 289 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 KLC2Q9H0B6 622 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 ATP13A3Q9H7F0 1226 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 ERVMER34-1Q9H9K5 563 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 PDFQ9HBH1 243 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 PCDH18Q9HCL0 1135 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 SEPT3Q9UH03 358 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 IPO11Q9UI26 975 aaKnown RBP11.71□□□□□ -0.53
CCDC12-209ENST00000604164 FADS3Q9Y5Q0 445 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 ACTL7AQ9Y615 435 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 NUMA1Q14980 2115 aa11.71□□□□□ -0.54
CCDC12-209ENST00000604164 A0A1W2PR77 199 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 J3KR12 359 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 TRIM16O95361 564 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 IPO7O95373 1038 aaKnown RBP11.7□□□□□ -0.54
CCDC12-209ENST00000604164 NFKBIAP25963 317 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 SERPINA4P29622 427 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 SLC1A1P43005 524 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 GRK6P43250 576 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 BNC1Q01954 994 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 ELP6Q0PNE2 266 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 CYTH1Q15438 398 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 SPA17Q15506 151 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 ZNF284Q2VY69 593 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 ODF2Q5BJF6 829 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 N4BP2L1Q5TBK1 243 aaPredicted RBP11.7□□□□□ -0.54
CCDC12-209ENST00000604164 BRAT1Q6PJG6 821 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 PARS2Q7L3T8 475 aaKnown RBP11.7□□□□□ -0.54
CCDC12-209ENST00000604164 ARHGAP12Q8IWW6 846 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 ATPAF2Q8N5M1 289 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 PAF1Q8N7H5 531 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 OR2I1PQ8NGU4 316 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 SLC35G2Q8TBE7 412 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 FAM71BQ8TC56 605 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 SETD7Q8WTS6 366 aaKnown RBP11.7□□□□□ -0.54
CCDC12-209ENST00000604164 ASB12Q8WXK4 309 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 RFFLQ8WZ73 363 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 KLHDC7BQ96G42 594 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 KLHL32Q96NJ5 620 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 ELF4Q99607 663 aaPredicted RBP11.7□□□□□ -0.54
CCDC12-209ENST00000604164 CHP1Q99653 195 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 ZNF670Q9BS34 389 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 CALN1Q9BXU9 219 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 EBF2Q9HAK2 575 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 LHX3Q9UBR4 397 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 FNDC3AQ9Y2H6 1198 aaKnown RBP11.7□□□□□ -0.54
CCDC12-209ENST00000604164 CACNA1EQ15878 2313 aa11.7□□□□□ -0.54
CCDC12-209ENST00000604164 A0A1B0GTQ1 180 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 A0A1W2PQ67 120 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 A6NNZ2 444 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 SLC31A1O15431 190 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 SH3BP5O60239 455 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 MTA2O94776 668 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 TCF4P15884 667 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 AMPD1P23109 780 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 CYLC1P35663 651 aaPredicted RBP11.69□□□□□ -0.54
CCDC12-209ENST00000604164 NXPH1P58417 271 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 AP1S1P61966 158 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 POLR2LP62875 67 aaKnown RBP11.69□□□□□ -0.54
CCDC12-209ENST00000604164 ZNF235Q14590 738 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 MESDQ14696 234 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 LBRQ14739 615 aaKnown RBP11.69□□□□□ -0.54
CCDC12-209ENST00000604164 TMEM259Q4ZIN3 620 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 RALGPS1Q5JS13 557 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 TIGD7Q6NT04 549 aaPredicted RBP11.69□□□□□ -0.54
CCDC12-209ENST00000604164 ERAP2Q6P179 960 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 DBX2Q6ZNG2 339 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 SRLQ86TD4 932 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 VSIG1Q86XK7 387 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 NPWQ8N729 165 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 TMEM145Q8NBT3 493 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 CXorf40AQ8TE69 158 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 TSC1Q92574 1164 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 CALR3Q96L12 384 aaKnown RBP11.69□□□□□ -0.54
CCDC12-209ENST00000604164 LENG8Q96PV6 779 aaPredicted RBP11.69□□□□□ -0.54
CCDC12-209ENST00000604164 PSKH2Q96QS6 385 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 PANX2Q96RD6 677 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 PACSIN1Q9BY11 444 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 SLC17A9Q9BYT1 436 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 SUV39H2Q9H5I1 410 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 IL21RQ9HBE5 538 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 SPTLC3Q9NUV7 552 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 APOBEC2Q9Y235 224 aaKnown RBP11.69□□□□□ -0.54
CCDC12-209ENST00000604164 HS3ST3A1Q9Y663 406 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 SLCO1B1Q9Y6L6 691 aa11.69□□□□□ -0.54
CCDC12-209ENST00000604164 DCHS1Q96JQ0 3298 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms