RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 RNGTTO60942 597 aaKnown RBP19.62■□□□□ 0.73
UPF1-212ENST00000601689 IGHV4-34P06331 123 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 NFKBIAP25963 317 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 SERPINA4P29622 427 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 CSNK1DP48730 415 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 SUOXP51687 545 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 METAP1P53582 386 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 RPS21P63220 83 aaKnown RBP19.62■□□□□ 0.73
UPF1-212ENST00000601689 MMRN1Q13201 1228 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 STAT4Q14765 748 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 UAP1L1Q3KQV9 507 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 ATP13A4Q4VNC1 1196 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 PIP5KL1Q5T9C9 394 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 MARC1Q5VT66 337 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 KIAA1161Q6NSJ0 714 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 TTC7BQ86TV6 843 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 HCAR2Q8TDS4 363 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 SERAC1Q96JX3 654 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 ZNF641Q96N77 438 aaPredicted RBP19.62■□□□□ 0.73
UPF1-212ENST00000601689 ATP13A3Q9H7F0 1226 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 TM9SF3Q9HD45 589 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 KLHL11Q9NVR0 708 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 WDR87Q6ZQQ6 2873 aa19.62■□□□□ 0.73
UPF1-212ENST00000601689 C16orf96A6NNT2 1141 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 ZNF487B1APH4 448 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 PSTPIP1O43586 416 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 TSPAN6O43657 245 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 AP1G1O43747 822 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 DFNA5O60443 496 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 KRT1P04264 644 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 CD48P09326 243 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 COMTP21964 271 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 CD38P28907 300 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 ARSEP51690 589 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 POLR2LP62875 67 aaKnown RBP19.61■□□□□ 0.73
UPF1-212ENST00000601689 PAFAH1B3Q15102 231 aaKnown RBP19.61■□□□□ 0.73
UPF1-212ENST00000601689 BZW1Q7L1Q6 419 aaKnown RBP19.61■□□□□ 0.73
UPF1-212ENST00000601689 DAAM2Q86T65 1068 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 MINDY1Q8N5J2 469 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 EXOC2Q96KP1 924 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 RXFP3Q9NSD7 469 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 DKK3Q9UBP4 350 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 ALG6Q9Y672 507 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 TRPM6Q9BX84 2022 aa19.61■□□□□ 0.73
UPF1-212ENST00000601689 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.6■□□□□ 0.73
UPF1-212ENST00000601689 A0A1W2PQ67 120 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 PRAMEF26H0Y7S4 382 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 LATO43561 262 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 IL4RP24394 825 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 MAT2AP31153 395 aaKnown RBP19.6■□□□□ 0.73
UPF1-212ENST00000601689 GKP32189 559 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 CSNK1EP49674 416 aaKnown RBP19.6■□□□□ 0.73
UPF1-212ENST00000601689 SCNN1BP51168 640 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 BCL2L1Q07817 233 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 ELP6Q0PNE2 266 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 KIF5AQ12840 1032 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 GRIK2Q13002 908 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 SGCGQ13326 291 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 NAPEPLDQ6IQ20 393 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 SRLQ86TD4 932 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 HORMAD1Q86X24 394 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 FAM174AQ8TBP5 190 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 RNF157Q96PX1 679 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 PSKH2Q96QS6 385 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 SLC32A1Q9H598 525 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 SUV39H2Q9H5I1 410 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 ETNK2Q9NVF9 386 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 LHX3Q9UBR4 397 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 CACNA1EQ15878 2313 aa19.6■□□□□ 0.73
UPF1-212ENST00000601689 A0A1W2PQU0 124 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 APOL1O14791 398 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 BUB1BO60566 1050 aaPredicted RBP19.59■□□□□ 0.73
UPF1-212ENST00000601689 AKT2P31751 481 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 CETN2P41208 172 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 GARSP41250 739 aaKnown RBP19.59■□□□□ 0.73
UPF1-212ENST00000601689 VAV2P52735 878 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 AP1S1P61966 158 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 OVGP1Q12889 678 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 SLC14A1Q13336 389 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 TFDP2Q14188 446 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 SUZ12Q15022 739 aaKnown RBP19.59■□□□□ 0.73
UPF1-212ENST00000601689 RALGPS1Q5JS13 557 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 NCBP2-AS2Q69YL0 99 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 C11orf63Q6NUN7 778 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 ERAP2Q6P179 960 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 BRAT1Q6PJG6 821 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 PARS2Q7L3T8 475 aaKnown RBP19.59■□□□□ 0.73
UPF1-212ENST00000601689 ERMP1Q7Z2K6 904 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 RFX6Q8HWS3 928 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 NETO2Q8NC67 525 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 TSEN2Q8NCE0 465 aaKnown RBP19.59■□□□□ 0.73
UPF1-212ENST00000601689 PCDH19Q8TAB3 1148 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 RAPGEF5Q92565 580 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 FAF2Q96CS3 445 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 C1QTNF7Q9BXJ2 289 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 SCUBE2Q9NQ36 999 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 ANKRD6Q9Y2G4 727 aa19.59■□□□□ 0.73
UPF1-212ENST00000601689 A0A1B0GVT2 93 aa19.58■□□□□ 0.72
UPF1-212ENST00000601689 BTNL10A8MVZ5 291 aa19.58■□□□□ 0.72
UPF1-212ENST00000601689 CDX4O14627 284 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms