RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 SETMARQ53H47 684 aaPredicted RBP28.56■■■□□ 2.16
SSBP4-206ENST00000599699 TMCO4Q5TGY1 634 aa28.56■■■□□ 2.16
SSBP4-206ENST00000599699 NEK5Q6P3R8 708 aa28.56■■■□□ 2.16
SSBP4-206ENST00000599699 TSEN2Q8NCE0 465 aaKnown RBP28.56■■■□□ 2.16
SSBP4-206ENST00000599699 NSMCE1Q8WV22 266 aa28.56■■■□□ 2.16
SSBP4-206ENST00000599699 ZNF599Q96NL3 588 aa28.56■■■□□ 2.16
SSBP4-206ENST00000599699 SEPT3Q9UH03 358 aa28.56■■■□□ 2.16
SSBP4-206ENST00000599699 NEMP1O14524 444 aa28.55■■■□□ 2.16
SSBP4-206ENST00000599699 COMTP21964 271 aa28.55■■■□□ 2.16
SSBP4-206ENST00000599699 KDELR1P24390 212 aa28.55■■■□□ 2.16
SSBP4-206ENST00000599699 NUDT1P36639 197 aa28.55■■■□□ 2.16
SSBP4-206ENST00000599699 C21orf59P57076 290 aa28.55■■■□□ 2.16
SSBP4-206ENST00000599699 ZNF235Q14590 738 aa28.55■■■□□ 2.16
SSBP4-206ENST00000599699 IL27RAQ6UWB1 636 aa28.55■■■□□ 2.16
SSBP4-206ENST00000599699 RAD9BQ6WBX8 426 aa28.55■■■□□ 2.16
SSBP4-206ENST00000599699 HORMAD1Q86X24 394 aa28.55■■■□□ 2.16
SSBP4-206ENST00000599699 RHOT1Q8IXI2 618 aa28.55■■■□□ 2.16
SSBP4-206ENST00000599699 KLK6Q92876 244 aa28.55■■■□□ 2.16
SSBP4-206ENST00000599699 SKA1Q96BD8 255 aa28.55■■■□□ 2.16
SSBP4-206ENST00000599699 ANKRD6Q9Y2G4 727 aa28.55■■■□□ 2.16
SSBP4-206ENST00000599699 C10orf142B7Z368 130 aa28.54■■■□□ 2.16
SSBP4-206ENST00000599699 MFSD11O43934 449 aa28.54■■■□□ 2.16
SSBP4-206ENST00000599699 BUB1BO60566 1050 aaPredicted RBP28.54■■■□□ 2.16
SSBP4-206ENST00000599699 PIGNO95427 931 aa28.54■■■□□ 2.16
SSBP4-206ENST00000599699 KRT1P04264 644 aa28.54■■■□□ 2.16
SSBP4-206ENST00000599699 HADHBP55084 474 aaKnown RBP28.54■■■□□ 2.16
SSBP4-206ENST00000599699 GRM3Q14832 879 aa28.54■■■□□ 2.16
SSBP4-206ENST00000599699 KIF19Q2TAC6 998 aa28.54■■■□□ 2.16
SSBP4-206ENST00000599699 CFAP58Q5T655 872 aa28.54■■■□□ 2.16
SSBP4-206ENST00000599699 LRRC38Q5VT99 294 aa28.54■■■□□ 2.16
SSBP4-206ENST00000599699 NCBP2-AS2Q69YL0 99 aa28.54■■■□□ 2.16
SSBP4-206ENST00000599699 SRLQ86TD4 932 aa28.54■■■□□ 2.16
SSBP4-206ENST00000599699 TTC7BQ86TV6 843 aa28.54■■■□□ 2.16
SSBP4-206ENST00000599699 RAB7BQ96AH8 199 aa28.54■■■□□ 2.16
SSBP4-206ENST00000599699 CPEB1Q9BZB8 566 aaKnown RBP28.54■■■□□ 2.16
SSBP4-206ENST00000599699 DMTF1Q9Y222 760 aa28.54■■■□□ 2.16
SSBP4-206ENST00000599699 FADS3Q9Y5Q0 445 aa28.54■■■□□ 2.16
SSBP4-206ENST00000599699 ADAMTS9Q9P2N4 1935 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 A0A0A6YYK5 440 aaPredicted RBP28.53■■■□□ 2.16
SSBP4-206ENST00000599699 MAFKO60675 156 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 CER1O95813 267 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 XPAP23025 273 aaPredicted RBP28.53■■■□□ 2.16
SSBP4-206ENST00000599699 CD38P28907 300 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 RGRP47804 291 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 RENBPP51606 427 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 BNC1Q01954 994 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 SLC10A7Q0GE19 358 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 PAFAH1B3Q15102 231 aaKnown RBP28.53■■■□□ 2.16
SSBP4-206ENST00000599699 SLC45A4Q5BKX6 768 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 NAPEPLDQ6IQ20 393 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 BBS5Q8N3I7 341 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 PAF1Q8N7H5 531 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 FAF2Q96CS3 445 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 FEM1CQ96JP0 617 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 MAK16Q9BXY0 300 aaKnown RBP28.53■■■□□ 2.16
SSBP4-206ENST00000599699 GAREM1Q9H706 876 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 SNX11Q9Y5W9 270 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 PCDH15Q96QU1 1955 aa28.53■■■□□ 2.16
SSBP4-206ENST00000599699 SLC31A1O15431 190 aa28.52■■■□□ 2.16
SSBP4-206ENST00000599699 AP1G1O43747 822 aa28.52■■■□□ 2.16
SSBP4-206ENST00000599699 PRLRP16471 622 aa28.52■■■□□ 2.16
SSBP4-206ENST00000599699 ABL2P42684 1182 aa28.52■■■□□ 2.16
SSBP4-206ENST00000599699 NAP1L1P55209 391 aaKnown RBP28.52■■■□□ 2.16
SSBP4-206ENST00000599699 HLA-BQ31612 363 aa28.52■■■□□ 2.16
SSBP4-206ENST00000599699 LRRC73Q5JTD7 316 aa28.52■■■□□ 2.16
SSBP4-206ENST00000599699 LRRC49Q8IUZ0 686 aa28.52■■■□□ 2.16
SSBP4-206ENST00000599699 TRAF3IP1Q8TDR0 691 aaPredicted RBP28.52■■■□□ 2.16
SSBP4-206ENST00000599699 VOPP1Q96AW1 172 aa28.52■■■□□ 2.16
SSBP4-206ENST00000599699 RNF157Q96PX1 679 aa28.52■■■□□ 2.16
SSBP4-206ENST00000599699 ATP13A3Q9H7F0 1226 aa28.52■■■□□ 2.16
SSBP4-206ENST00000599699 DDX56Q9NY93 547 aaKnown RBP28.52■■■□□ 2.16
SSBP4-206ENST00000599699 ALG6Q9Y672 507 aa28.52■■■□□ 2.16
SSBP4-206ENST00000599699 DCHS1Q96JQ0 3298 aa28.52■■■□□ 2.16
SSBP4-206ENST00000599699 CACNA1EQ15878 2313 aa28.52■■■□□ 2.16
SSBP4-206ENST00000599699 TM4SF5O14894 197 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 WNT9AO14904 365 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 VILLO15195 856 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 MAP3K6O95382 1288 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 CSNK1DP48730 415 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 SCNN1BP51168 640 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 RPS21P63220 83 aaKnown RBP28.51■■■□□ 2.15
SSBP4-206ENST00000599699 NSUN2Q08J23 767 aaKnown RBP eCLIP28.51■■■□□ 2.15
SSBP4-206ENST00000599699 STAT4Q14765 748 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 ZNF284Q2VY69 593 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 SEL1L3Q68CR1 1132 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 KIAA1161Q6NSJ0 714 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 PQLC3Q8N755 202 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 ACRBPQ8NEB7 543 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 RNF25Q96BH1 459 aaPredicted RBP28.51■■■□□ 2.15
SSBP4-206ENST00000599699 PSKH2Q96QS6 385 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 TUBGCP5Q96RT8 1024 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 MYOCQ99972 504 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 GOLPH3Q9H4A6 298 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 SUV39H2Q9H5I1 410 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 DNAAF2Q9NVR5 837 aaKnown RBP28.51■■■□□ 2.15
SSBP4-206ENST00000599699 DKK3Q9UBP4 350 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 ZFR2Q9UPR6 939 aaKnown RBP28.51■■■□□ 2.15
SSBP4-206ENST00000599699 ITM2BQ9Y287 266 aa28.51■■■□□ 2.15
SSBP4-206ENST00000599699 PRAMEF26H0Y7S4 382 aa28.5■■■□□ 2.15
SSBP4-206ENST00000599699 MUSKO15146 869 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms