RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 IL1R2P27930 398 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 AKT2P31751 481 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 HTR7P34969 479 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 ARRB1P49407 418 aaPredicted RBP13.24□□□□□ -0.29
LIG1-212ENST00000596549 RHOAP61586 193 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 CCDC15Q0P6D6 951 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 DNAJC3Q13217 504 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 MAPK8IP2Q13387 824 aaPredicted RBP13.24□□□□□ -0.29
LIG1-212ENST00000596549 CYTH1Q15438 398 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 ZSCAN23Q3MJ62 389 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 INO80DQ53TQ3 878 aaPredicted RBP13.24□□□□□ -0.29
LIG1-212ENST00000596549 ERMARDQ5T6L9 678 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 KYAT3Q6YP21 454 aaKnown RBP13.24□□□□□ -0.29
LIG1-212ENST00000596549 TMPRSS7Q7RTY8 843 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 MARCH9Q86YJ5 346 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 EID2Q8N6I1 236 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 CASKIN2Q8WXE0 1202 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 ZCCHC14Q8WYQ9 949 aaKnown RBP13.24□□□□□ -0.29
LIG1-212ENST00000596549 KLHDC7BQ96G42 594 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 LRIG1Q96JA1 1093 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 BMFQ96LC9 184 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 KLF6Q99612 283 aaPredicted RBP13.24□□□□□ -0.29
LIG1-212ENST00000596549 OSBPL1AQ9BXW6 950 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 MYO1AQ9UBC5 1043 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 MFHAS1Q9Y4C4 1052 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 FREM2Q5SZK8 3169 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 TMEM8BA6NDV4 472 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 POM121BA6NF01 834 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 A6NNZ2 444 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 ENC1O14682 589 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 AREL1O15033 823 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 MAGEC1O60732 1142 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 PRAMEF11O60813 436 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 PIGNO95427 931 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 GIMD1P0DJR0 217 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 DESP17661 470 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 ERCC2P18074 760 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 RGRP47804 291 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 ACADVLP49748 655 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 NDST2P52849 883 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 CLDN6P56747 220 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 UBASH3AP57075 661 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 RPS21P63220 83 aaKnown RBP13.23□□□□□ -0.29
LIG1-212ENST00000596549 MYLK3Q32MK0 819 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 TPRG1LQ5T0D9 272 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 AFMIDQ63HM1 303 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 TXNRD3NBQ6F5E7 133 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 DHRS13Q6UX07 377 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 GDPD4Q6W3E5 623 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 CCNI2Q6ZMN8 369 aaPredicted RBP13.23□□□□□ -0.29
LIG1-212ENST00000596549 ARHGAP36Q6ZRI8 547 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 RFX8Q6ZV50 586 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 TP53INP2Q8IXH6 220 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 RAB7BQ96AH8 199 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 TRIM11Q96F44 468 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 CNDP2Q96KP4 475 aaKnown RBP13.23□□□□□ -0.29
LIG1-212ENST00000596549 CALN1Q9BXU9 219 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 SLC17A9Q9BYT1 436 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 SLC39A8Q9C0K1 460 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 THAP2Q9H0W7 228 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 IFNKQ9P0W0 207 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 UBA2Q9UBT2 640 aaPredicted RBP13.23□□□□□ -0.29
LIG1-212ENST00000596549 NENFQ9UMX5 172 aa13.23□□□□□ -0.29
LIG1-212ENST00000596549 A0A087X0T9 212 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 EIF3CLB5ME19 914 aaKnown RBP13.22□□□□□ -0.29
LIG1-212ENST00000596549 PRPSAP2O60256 369 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 RNF8O76064 485 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 POP4O95707 220 aaKnown RBP13.22□□□□□ -0.29
LIG1-212ENST00000596549 PAK4O96013 591 aaPredicted RBP13.22□□□□□ -0.29
LIG1-212ENST00000596549 FAM228BP0C875 321 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 MYBL1P10243 752 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 ITIH2P19823 946 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 IGFALSP35858 605 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 PAPOLAP51003 745 aaKnown RBP13.22□□□□□ -0.29
LIG1-212ENST00000596549 TPM4P67936 248 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 ZBED6P86452 979 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 DPYSQ14117 519 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 SMTNL2Q2TAL5 461 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 CCDC157Q569K6 752 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 PPP6R3Q5H9R7 873 aaPredicted RBP13.22□□□□□ -0.29
LIG1-212ENST00000596549 PTAR1Q7Z6K3 402 aaPredicted RBP13.22□□□□□ -0.29
LIG1-212ENST00000596549 ZSWIM9Q86XI8 627 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 TSC1Q92574 1164 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 SYN2Q92777 582 aaPredicted RBP13.22□□□□□ -0.29
LIG1-212ENST00000596549 ARHGEF26Q96DR7 871 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 BTBD6Q96KE9 485 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 EIF3CQ99613 913 aaKnown RBP13.22□□□□□ -0.29
LIG1-212ENST00000596549 C1QTNF2Q9BXJ5 285 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 UCKL1Q9NWZ5 548 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 CWC15Q9P013 229 aaKnown RBP13.22□□□□□ -0.29
LIG1-212ENST00000596549 CAPN11Q9UMQ6 739 aa13.22□□□□□ -0.29
LIG1-212ENST00000596549 TSPAN11A1L157 253 aa13.21□□□□□ -0.29
LIG1-212ENST00000596549 FAM149AA5PLN7 773 aa13.21□□□□□ -0.29
LIG1-212ENST00000596549 IGLON5A6NGN9 336 aa13.21□□□□□ -0.29
LIG1-212ENST00000596549 GOLGA6L19H0YKK7 550 aa13.21□□□□□ -0.29
LIG1-212ENST00000596549 TSPAN6O43657 245 aa13.21□□□□□ -0.29
LIG1-212ENST00000596549 RFPL3O75679 317 aa13.21□□□□□ -0.29
LIG1-212ENST00000596549 PIAS2O75928 621 aa13.21□□□□□ -0.29
LIG1-212ENST00000596549 LDOC1O95751 146 aaPredicted RBP13.21□□□□□ -0.29
LIG1-212ENST00000596549 SERPING1P05155 500 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms