RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.25□□□□□ -0.61
LIG1-211ENST00000596457 PLXNA2O75051 1894 aa11.25□□□□□ -0.61
LIG1-211ENST00000596457 CXorf51AA0A1B0GTR3 108 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 GRID2IPA4D2P6 1211 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 MAFKO60675 156 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 PCDH8O95206 1070 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 ZRANB2O95218 330 aaKnown RBP eCLIP11.24□□□□□ -0.61
LIG1-211ENST00000596457 PIGNO95427 931 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 MAT2AP31153 395 aaKnown RBP11.24□□□□□ -0.61
LIG1-211ENST00000596457 DPP6P42658 865 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 RGRP47804 291 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 SCNN1BP51168 640 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 ADPRHP54922 357 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 GBE1Q04446 702 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 SLC10A7Q0GE19 358 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 SLC10A2Q12908 348 aaPredicted RBP11.24□□□□□ -0.61
LIG1-211ENST00000596457 AASDHQ4L235 1098 aaPredicted RBP11.24□□□□□ -0.61
LIG1-211ENST00000596457 TMCO4Q5TGY1 634 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 KIAA0895LQ68EN5 471 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 GDPD4Q6W3E5 623 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 SPOCD1Q6ZMY3 1216 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 B4GALNT4Q76KP1 1039 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 ERN2Q76MJ5 926 aaKnown RBP11.24□□□□□ -0.61
LIG1-211ENST00000596457 PEX26Q7Z412 305 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 SRLQ86TD4 932 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 SYT12Q8IV01 421 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 RCOR2Q8IZ40 523 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 BBS5Q8N3I7 341 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 CADM4Q8NFZ8 388 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 OR2T34Q8NGX1 318 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 KRT35Q92764 455 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 KLK6Q92876 244 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 BIRC7Q96CA5 298 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 FAF2Q96CS3 445 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 CALR3Q96L12 384 aaKnown RBP11.24□□□□□ -0.61
LIG1-211ENST00000596457 ZNF830Q96NB3 372 aaPredicted RBP11.24□□□□□ -0.61
LIG1-211ENST00000596457 NT5MQ9NPB1 228 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 LZTFL1Q9NQ48 299 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 FSCN3Q9NQT6 498 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 VPS45Q9NRW7 570 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 FZD4Q9ULV1 537 aa11.24□□□□□ -0.61
LIG1-211ENST00000596457 PACSIN2Q9UNF0 486 aaPredicted RBP11.24□□□□□ -0.61
LIG1-211ENST00000596457 NUMA1Q14980 2115 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 C16orf96A6NNT2 1141 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 SLC30A4O14863 429 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 KHNYNO15037 678 aaKnown RBP11.23□□□□□ -0.61
LIG1-211ENST00000596457 MUSKO15146 869 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 KRT86O43790 486 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 RNGTTO60942 597 aaKnown RBP11.23□□□□□ -0.61
LIG1-211ENST00000596457 GJB3O75712 270 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 FTCDO95954 541 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 ZFXP17010 805 aaPredicted RBP11.23□□□□□ -0.61
LIG1-211ENST00000596457 XPAP23025 273 aaPredicted RBP11.23□□□□□ -0.61
LIG1-211ENST00000596457 GARSP41250 739 aaKnown RBP11.23□□□□□ -0.61
LIG1-211ENST00000596457 MMP13P45452 471 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 RENBPP51606 427 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 NEK3P51956 506 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 LIMK1P53667 647 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 MAXP61244 160 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 CCZ1BP86790 482 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 CCZ1P86791 482 aaPredicted RBP11.23□□□□□ -0.61
LIG1-211ENST00000596457 CCDC15Q0P6D6 951 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 GALNT2Q10471 571 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 AP1B1Q10567 949 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 RFTN1Q14699 578 aaPredicted RBP11.23□□□□□ -0.61
LIG1-211ENST00000596457 TRIM61Q5EBN2 209 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 LRRC73Q5JTD7 316 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 FAM182AQ5T1J6 154 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 CFAP58Q5T655 872 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 MARC1Q5VT66 337 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 AGBL4Q5VU57 503 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 PARS2Q7L3T8 475 aaKnown RBP11.23□□□□□ -0.61
LIG1-211ENST00000596457 TTC7BQ86TV6 843 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 PLPP6Q8IY26 295 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 KATNAL2Q8IYT4 538 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 SYCE1Q8N0S2 351 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 ZCCHC9Q8N567 271 aaKnown RBP11.23□□□□□ -0.61
LIG1-211ENST00000596457 PLD5Q8N7P1 536 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 HAUS1Q96CS2 278 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 RBM41Q96IZ5 413 aaKnown RBP11.23□□□□□ -0.61
LIG1-211ENST00000596457 ZNF599Q96NL3 588 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 HEMGNQ9BXL5 484 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 NUSAP1Q9BXS6 441 aaKnown RBP11.23□□□□□ -0.61
LIG1-211ENST00000596457 TSGA10Q9BZW7 698 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 SCUBE2Q9NQ36 999 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 SEPT10Q9P0V9 454 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 SEPT3Q9UH03 358 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 PILRBQ9UKJ0 227 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 TTLL3Q9Y4R7 772 aa11.23□□□□□ -0.61
LIG1-211ENST00000596457 NEMP1O14524 444 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 PLRG1O43660 514 aaKnown RBP11.22□□□□□ -0.61
LIG1-211ENST00000596457 GDF9O60383 454 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 CST8O60676 142 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 CCDC175P0C221 793 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 ADRB3P13945 408 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 GNSP15586 552 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 ITIH2P19823 946 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 MX2P20592 715 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 CCNCP24863 283 aa11.22□□□□□ -0.61
LIG1-211ENST00000596457 ITGB7P26010 798 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms