RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 OSBPL2Q9H1P3 480 aa13.13□□□□□ -0.31
SCAF1-202ENST00000595242 ACBD3Q9H3P7 528 aa13.13□□□□□ -0.31
SCAF1-202ENST00000595242 SEPT3Q9UH03 358 aa13.13□□□□□ -0.31
SCAF1-202ENST00000595242 KIAA1257Q9ULG3 409 aa13.13□□□□□ -0.31
SCAF1-202ENST00000595242 STRIP2Q9ULQ0 834 aa13.13□□□□□ -0.31
SCAF1-202ENST00000595242 CEP83Q9Y592 693 aa13.13□□□□□ -0.31
SCAF1-202ENST00000595242 A0A1B0GVM2 712 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 FAM187AA6NFU0 413 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 TMEM191CA6NGB0 347 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 C10orf142B7Z368 130 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 HHLA1C9JL84 531 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 MYO1FO00160 1098 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 MID1O15344 667 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 PHF2O75151 1096 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 ATP5BP06576 529 aaKnown RBP13.12□□□□□ -0.31
SCAF1-202ENST00000595242 DLDP09622 509 aaKnown RBP13.12□□□□□ -0.31
SCAF1-202ENST00000595242 VDRP11473 427 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 SLC7A5Q01650 507 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 EFEMP1Q12805 493 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 CUL1Q13616 776 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 DHX34Q14147 1143 aaKnown RBP13.12□□□□□ -0.31
SCAF1-202ENST00000595242 STILQ15468 1287 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 MPPE1Q53F39 396 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 XKR5Q6UX68 686 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 CLEC20AQ6ZU45 233 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 MAATS1Q7Z4T9 603 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 SCD5Q86SK9 330 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 CPNE8Q86YQ8 564 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 SLC13A5Q86YT5 568 aaPredicted RBP13.12□□□□□ -0.31
SCAF1-202ENST00000595242 KLHL7Q8IXQ5 586 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 FAM217AQ8IXS0 508 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 AHI1Q8N157 1196 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 MREGQ8N565 214 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 NIPA2Q8N8Q9 360 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 C12orf29Q8N999 325 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 C3orf20Q8ND61 904 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 C1orf131Q8NDD1 294 aaKnown RBP13.12□□□□□ -0.31
SCAF1-202ENST00000595242 CDK5RAP1Q96SZ6 601 aaKnown RBP13.12□□□□□ -0.31
SCAF1-202ENST00000595242 AP1M1Q9BXS5 423 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 DDX47Q9H0S4 455 aaKnown RBP13.12□□□□□ -0.31
SCAF1-202ENST00000595242 FAM49BQ9NUQ9 324 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 ABCB8Q9NUT2 735 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 CLIC5Q9NZA1 410 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 IP6K2Q9UHH9 426 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 GGA2Q9UJY4 613 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 FZD4Q9ULV1 537 aa13.12□□□□□ -0.31
SCAF1-202ENST00000595242 A0A1W2PNU3 283 aaPredicted RBP13.11□□□□□ -0.31
SCAF1-202ENST00000595242 O00370 1275 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 RNASEH1O60930 286 aaKnown RBP13.11□□□□□ -0.31
SCAF1-202ENST00000595242 FAM200BP0CF97 657 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 PYGMP11217 842 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 CKMT1AP12532 417 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 ADORA2BP29275 332 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 CHRNA3P32297 505 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 GABRB2P47870 512 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 RNASE9P60153 205 aaKnown RBP13.11□□□□□ -0.31
SCAF1-202ENST00000595242 TLE1Q04724 770 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 CLN3Q13286 438 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 SERINC3Q13530 473 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 SIX1Q15475 284 aaPredicted RBP13.11□□□□□ -0.31
SCAF1-202ENST00000595242 CST6Q15828 149 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 CNGA2Q16280 664 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 ISXQ2M1V0 245 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 LRRC38Q5VT99 294 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 MBLAC2Q68D91 279 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 KIAA0907Q7Z7F0 614 aaPredicted RBP13.11□□□□□ -0.31
SCAF1-202ENST00000595242 KATNAL2Q8IYT4 538 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 OR4C6Q8NH72 309 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 MAIP1Q8WWC4 291 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 CASKIN2Q8WXE0 1202 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 TWNKQ96RR1 684 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 CCNL2Q96S94 520 aaPredicted RBP13.11□□□□□ -0.31
SCAF1-202ENST00000595242 TRIM7Q9C029 511 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 EPB41L5Q9HCM4 733 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 PCYOX1Q9UHG3 505 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 HPCAL4Q9UM19 191 aa13.11□□□□□ -0.31
SCAF1-202ENST00000595242 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.11□□□□□ -0.31
SCAF1-202ENST00000595242 FAM170AA1A519 330 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 FFAR2O15552 330 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 EFSO43281 561 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 MAGEC1O60732 1142 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 SIN3BO75182 1162 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 GP1BAP07359 652 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 PABPC1P11940 636 aaKnown RBP13.1□□□□□ -0.31
SCAF1-202ENST00000595242 CR2P20023 1033 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 ECHS1P30084 290 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 ADPRHP54922 357 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 GUCY2DQ02846 1103 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 GPS2Q13227 327 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 PTPN20Q4JDL3 420 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 ZNF394Q53GI3 561 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 NAPEPLDQ6IQ20 393 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 DENND1BQ6P3S1 775 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 DNAJC24Q6P3W2 148 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 IQCHQ86VS3 1027 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 UNC93AQ86WB7 457 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 MMAAQ8IVH4 418 aaKnown RBP13.1□□□□□ -0.31
SCAF1-202ENST00000595242 RHOT1Q8IXI2 618 aa13.1□□□□□ -0.31
SCAF1-202ENST00000595242 GSPT2Q8IYD1 628 aaKnown RBP13.1□□□□□ -0.31
SCAF1-202ENST00000595242 CRYBG2Q8N1P7 616 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms