RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 APOBEC2Q9Y235 224 aaKnown RBP18■□□□□ 0.47
SHKBP1-204ENST00000594862 FADS3Q9Y5Q0 445 aa18■□□□□ 0.47
SHKBP1-204ENST00000594862 TMEM131Q92545 1883 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 SPAARA0A1B0GVQ0 90 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 C16orf96A6NNT2 1141 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 NEMP1O14524 444 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 AKR1B10O60218 316 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 WNT1P04628 370 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 UGT2B4P06133 528 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 ZNF284Q2VY69 593 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 TMEM259Q4ZIN3 620 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 TMCO3Q6UWJ1 677 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 LEKR1Q6ZMV7 388 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 TMEM145Q8NBT3 493 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 RNF214Q8ND24 703 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 OR6K2Q8NGY2 324 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 ZNF564Q8TBZ8 553 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 TUBGCP5Q96RT8 1024 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 ABHD10Q9NUJ1 306 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 CWC15Q9P013 229 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 CTTNBP2NLQ9P2B4 639 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 ACTL7AQ9Y615 435 aa17.99■□□□□ 0.47
SHKBP1-204ENST00000594862 CEP295Q9C0D2 2601 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 CBFA2T3O75081 653 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 MFAP3LO75121 409 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 CSNK1DP48730 415 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 PAPOLAP51003 745 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 IL10RBQ08334 325 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 FOXC1Q12948 553 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 ST3GAL2Q16842 350 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 ATXN7L2Q5T6C5 722 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 SARM1Q6SZW1 724 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 DCP2Q8IU60 420 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 BAHD1Q8TBE0 780 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 RHBDD1Q8TEB9 315 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 ASB12Q8WXK4 309 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 HSPH1Q92598 858 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 KLHDC7BQ96G42 594 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 CELF6Q96J87 481 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 ZNF599Q96NL3 588 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 SLC39A8Q9C0K1 460 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 KLC2Q9H0B6 622 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 LHX3Q9UBR4 397 aa17.98■□□□□ 0.47
SHKBP1-204ENST00000594862 A6NNZ2 444 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 DFFAO00273 331 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 SLC31A1O15431 190 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 PALMO75781 387 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 TMEM253P0C7T8 217 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 RARAP10276 462 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 XPAP23025 273 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 IL1R2P27930 398 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 RXRGP48443 463 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 RENBPP51606 427 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 SLC25A11Q02978 314 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 SGCGQ13326 291 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 KRT81Q14533 505 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 SMTNL2Q2TAL5 461 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 KCNT1Q5JUK3 1230 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 CFAP58Q5T655 872 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 POLNQ7Z5Q5 900 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 DENND6BQ8NEG7 585 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 CCDC42Q96M95 316 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 ZNF641Q96N77 438 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 KLHL32Q96NJ5 620 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 CINPQ9BW66 212 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 C1QTNF7Q9BXJ2 289 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 SLC17A9Q9BYT1 436 aa17.97■□□□□ 0.47
SHKBP1-204ENST00000594862 PCNX2A6NKB5 2137 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 COL5A1P20908 1838 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 WNT9AO14904 365 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 PROSCO94903 275 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 ITGAVP06756 1048 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 KRT7P08729 469 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 THEGLP0DJG4 465 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 PRLRP16471 622 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 EPHA8P29322 1005 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 MAN1A1P33908 653 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 HSPA9P38646 679 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 SSR1P43307 286 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 ELP6Q0PNE2 266 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 CYTH1Q15438 398 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 ASTE1Q2TB18 679 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 BRAT1Q6PJG6 821 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 KYAT3Q6YP21 454 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 ABI3BPQ7Z7G0 1075 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 LRRC49Q8IUZ0 686 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 ARHGAP12Q8IWW6 846 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 BBS5Q8N3I7 341 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 NPWQ8N729 165 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 NSMCE1Q8WV22 266 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 CAMK1GQ96NX5 476 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 CSPG4P5Q96PW8 444 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 SEPT3Q9UH03 358 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 IPO11Q9UI26 975 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 HS3ST3A1Q9Y663 406 aa17.96■□□□□ 0.47
SHKBP1-204ENST00000594862 TSPAN11A1L157 253 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 J3KR12 359 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 RNF103O00237 685 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 AREL1O15033 823 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 TNFSF14O43557 240 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms