RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 AKT2P31751 481 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 ABCG1P45844 678 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 RECQLP46063 649 aaPredicted RBP12.71□□□□□ -0.37
UPF1-203ENST00000594504 HDAC4P56524 1084 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 DAB2P98082 770 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 ZNF211Q13398 564 aaPredicted RBP12.71□□□□□ -0.37
UPF1-203ENST00000594504 RTP5Q14D33 572 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 ASTE1Q2TB18 679 aaPredicted RBP12.71□□□□□ -0.37
UPF1-203ENST00000594504 ARL13BQ3SXY8 428 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 CARD16Q5EG05 197 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 NEK5Q6P3R8 708 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 LEKR1Q6ZMV7 388 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 TC2NQ8N9U0 490 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 FNIP1Q8TF40 1166 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 CCDC42Q96M95 316 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 HAPLN3Q96S86 360 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 HEPHQ9BQS7 1158 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 SLC17A9Q9BYT1 436 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 ZYG11BQ9C0D3 744 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 NRSN2Q9GZP1 204 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 OSBPL2Q9H1P3 480 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 NENFQ9UMX5 172 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 CLCA2Q9UQC9 943 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 PCDHB1Q9Y5F3 818 aa12.71□□□□□ -0.37
UPF1-203ENST00000594504 POM121BA6NF01 834 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 TMEM191CA6NGB0 347 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 FAM72CH0Y354 149 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 AKR1B10O60218 316 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 BRINP1O60477 761 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 NEBLO76041 1014 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 PRB1P04280 392 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 ADRB3P13945 408 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 L1CAMP32004 1257 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 ADRA1BP35368 520 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 SERPINH1P50454 418 aaKnown RBP12.7□□□□□ -0.38
UPF1-203ENST00000594504 CLCN6P51797 869 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 CCNHP51946 323 aaPredicted RBP12.7□□□□□ -0.38
UPF1-203ENST00000594504 NEK3P51956 506 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 GNA12Q03113 381 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 ILKQ13418 452 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 TMEM259Q4ZIN3 620 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 FAM72AQ5TYM5 149 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 FAM72DQ6L9T8 149 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 FAM72BQ86X60 149 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 NETO2Q8NC67 525 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 OR6K2Q8NGY2 324 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 OR4C6Q8NH72 309 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 NTAN1Q96AB6 310 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 CHP1Q99653 195 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 HDAC8Q9BY41 377 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 TM6SF2Q9BZW4 377 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 THAP2Q9H0W7 228 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 NHEJ1Q9H9Q4 299 aaPredicted RBP12.7□□□□□ -0.38
UPF1-203ENST00000594504 MYO1AQ9UBC5 1043 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 DNAI1Q9UI46 699 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 GGT7Q9UJ14 662 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 FADS3Q9Y5Q0 445 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 TRPM6Q9BX84 2022 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 DMXL2Q8TDJ6 3036 aa12.7□□□□□ -0.38
UPF1-203ENST00000594504 LY6G6EA0A0G2JKS1 128 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 CYP1A2P05177 515 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 PSMA2P25787 234 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 CDC25BP30305 580 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 OGDHQ02218 1023 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 CCDC15Q0P6D6 951 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 TPRG1LQ5T0D9 272 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 RETSATQ6NUM9 610 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 LRRC69Q6ZNQ3 347 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 PARS2Q7L3T8 475 aaKnown RBP12.69□□□□□ -0.38
UPF1-203ENST00000594504 PTAR1Q7Z6K3 402 aaPredicted RBP12.69□□□□□ -0.38
UPF1-203ENST00000594504 ABI3BPQ7Z7G0 1075 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 RYBPQ8N488 228 aaPredicted RBP12.69□□□□□ -0.38
UPF1-203ENST00000594504 DCBLD1Q8N8Z6 715 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 RFFLQ8WZ73 363 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 VOPP1Q96AW1 172 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 PPP1R16AQ96I34 528 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 FEM1CQ96JP0 617 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 APOLD1Q96LR9 279 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 ZDHHC6Q9H6R6 413 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 DNAJC28Q9NX36 388 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 HECAQ9UBI9 543 aaPredicted RBP12.69□□□□□ -0.38
UPF1-203ENST00000594504 PPARGC1AQ9UBK2 798 aaKnown RBP12.69□□□□□ -0.38
UPF1-203ENST00000594504 OR12D3Q9UGF7 316 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 KLF15Q9UIH9 416 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 ITM2BQ9Y287 266 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 HS3ST3A1Q9Y663 406 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 U3KQA8 63 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 CEP295Q9C0D2 2601 aa12.69□□□□□ -0.38
UPF1-203ENST00000594504 FAM208BQ5VWN6 2430 aa12.68□□□□□ -0.38
UPF1-203ENST00000594504 ZZEF1O43149 2961 aa12.68□□□□□ -0.38
UPF1-203ENST00000594504 IGLON5A6NGN9 336 aa12.68□□□□□ -0.38
UPF1-203ENST00000594504 A6NNZ2 444 aa12.68□□□□□ -0.38
UPF1-203ENST00000594504 SPINT1O43278 529 aa12.68□□□□□ -0.38
UPF1-203ENST00000594504 RNF8O76064 485 aa12.68□□□□□ -0.38
UPF1-203ENST00000594504 ITIH2P19823 946 aa12.68□□□□□ -0.38
UPF1-203ENST00000594504 ITGB7P26010 798 aa12.68□□□□□ -0.38
UPF1-203ENST00000594504 ABL2P42684 1182 aa12.68□□□□□ -0.38
UPF1-203ENST00000594504 AIF1P55008 147 aa12.68□□□□□ -0.38
UPF1-203ENST00000594504 E2F1Q01094 437 aa12.68□□□□□ -0.38
UPF1-203ENST00000594504 NRG1Q02297 640 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms