RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 STRADAQ7RTN6 431 aa23■■□□□ 1.27
SSBP4-203ENST00000593641 PHLDB2Q86SQ0 1253 aa23■■□□□ 1.27
SSBP4-203ENST00000593641 ZNF354CQ86Y25 554 aa23■■□□□ 1.27
SSBP4-203ENST00000593641 BTN2A2Q8WVV5 523 aa23■■□□□ 1.27
SSBP4-203ENST00000593641 IL12RB2Q99665 862 aa23■■□□□ 1.27
SSBP4-203ENST00000593641 RAB6CQ9H0N0 254 aa23■■□□□ 1.27
SSBP4-203ENST00000593641 NUP62CLQ9H1M0 184 aa23■■□□□ 1.27
SSBP4-203ENST00000593641 POLR1BQ9H9Y6 1135 aa23■■□□□ 1.27
SSBP4-203ENST00000593641 TAB2Q9NYJ8 693 aa23■■□□□ 1.27
SSBP4-203ENST00000593641 GGT7Q9UJ14 662 aa23■■□□□ 1.27
SSBP4-203ENST00000593641 NOCTQ9UK39 431 aaKnown RBP23■■□□□ 1.27
SSBP4-203ENST00000593641 KIF26BQ2KJY2 2108 aa22.99■■□□□ 1.27
SSBP4-203ENST00000593641 CPED1A4D0V7 1026 aa22.99■■□□□ 1.27
SSBP4-203ENST00000593641 ZSCAN5CA6NGD5 496 aaPredicted RBP22.99■■□□□ 1.27
SSBP4-203ENST00000593641 C2CD4BA6NLJ0 364 aa22.99■■□□□ 1.27
SSBP4-203ENST00000593641 DXOO77932 396 aaKnown RBP22.99■■□□□ 1.27
SSBP4-203ENST00000593641 PTPN9P43378 593 aa22.99■■□□□ 1.27
SSBP4-203ENST00000593641 LSSP48449 732 aa22.99■■□□□ 1.27
SSBP4-203ENST00000593641 PFN3P60673 137 aa22.99■■□□□ 1.27
SSBP4-203ENST00000593641 PTK2BQ14289 1009 aa22.99■■□□□ 1.27
SSBP4-203ENST00000593641 DEFB133Q30KQ1 61 aa22.99■■□□□ 1.27
SSBP4-203ENST00000593641 GPT2Q8TD30 523 aa22.99■■□□□ 1.27
SSBP4-203ENST00000593641 SPASTQ9UBP0 616 aa22.99■■□□□ 1.27
SSBP4-203ENST00000593641 KLF15Q9UIH9 416 aa22.99■■□□□ 1.27
SSBP4-203ENST00000593641 SALL4Q9UJQ4 1053 aa22.99■■□□□ 1.27
SSBP4-203ENST00000593641 FAM72CH0Y354 149 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 TPP1O14773 563 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 SPINT1O43278 529 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 TPM2P07951 284 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 PLEKP08567 350 aaPredicted RBP22.98■■□□□ 1.27
SSBP4-203ENST00000593641 ERVPABLB-1P60509 514 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 FMO1Q01740 532 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 RAD51Q06609 339 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 MYLK3Q32MK0 819 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 CT47A1Q5JQC4 288 aaPredicted RBP22.98■■□□□ 1.27
SSBP4-203ENST00000593641 FAM72AQ5TYM5 149 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 FAM72DQ6L9T8 149 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 GUSBP11Q6P575 273 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 TRIM72Q6ZMU5 477 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 LEKR1Q6ZMV7 388 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 EFL1Q7Z2Z2 1120 aaKnown RBP22.98■■□□□ 1.27
SSBP4-203ENST00000593641 FAM72BQ86X60 149 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 JOSD2Q8TAC2 188 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 SLC30A5Q8TAD4 765 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 FAM172AQ8WUF8 416 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 GLMNQ92990 594 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 HIC2Q96JB3 615 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 GDAP1L1Q96MZ0 367 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 KLHL32Q96NJ5 620 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 C1QTNF7Q9BXJ2 289 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 GANQ9H2C0 597 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 THSD1Q9NS62 852 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 APOBEC3BQ9UH17 382 aaKnown RBP22.98■■□□□ 1.27
SSBP4-203ENST00000593641 NEU3Q9UQ49 428 aa22.98■■□□□ 1.27
SSBP4-203ENST00000593641 LZTS3O60299 673 aaPredicted RBP22.97■■□□□ 1.27
SSBP4-203ENST00000593641 SOX5P35711 763 aa22.97■■□□□ 1.27
SSBP4-203ENST00000593641 RPIAP49247 311 aa22.97■■□□□ 1.27
SSBP4-203ENST00000593641 UCNP55089 124 aa22.97■■□□□ 1.27
SSBP4-203ENST00000593641 TMPRSS3P57727 454 aa22.97■■□□□ 1.27
SSBP4-203ENST00000593641 POLR2FP61218 127 aaKnown RBP22.97■■□□□ 1.27
SSBP4-203ENST00000593641 EIF2B5Q13144 721 aaKnown RBP22.97■■□□□ 1.27
SSBP4-203ENST00000593641 NR0B2Q15466 257 aa22.97■■□□□ 1.27
SSBP4-203ENST00000593641 ISXQ2M1V0 245 aa22.97■■□□□ 1.27
SSBP4-203ENST00000593641 TPRG1LQ5T0D9 272 aa22.97■■□□□ 1.27
SSBP4-203ENST00000593641 ATXN7L2Q5T6C5 722 aaPredicted RBP22.97■■□□□ 1.27
SSBP4-203ENST00000593641 TTC7BQ86TV6 843 aa22.97■■□□□ 1.27
SSBP4-203ENST00000593641 CCDC185Q8N715 623 aa22.97■■□□□ 1.27
SSBP4-203ENST00000593641 TPCN2Q8NHX9 752 aa22.97■■□□□ 1.27
SSBP4-203ENST00000593641 CXorf40AQ8TE69 158 aa22.97■■□□□ 1.27
SSBP4-203ENST00000593641 FAM207AQ9NSI2 230 aaPredicted RBP22.97■■□□□ 1.27
SSBP4-203ENST00000593641 EME2A4GXA9 379 aaPredicted RBP22.96■■□□□ 1.27
SSBP4-203ENST00000593641 BUB1O43683 1085 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 KDELR3O43731 214 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 TM7SF2O76062 418 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 TMCC1O94876 653 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 GJB6O95452 261 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 IGSF6O95976 241 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 KRT3P12035 628 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 TGM2P21980 687 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 NSFP46459 744 aaKnown RBP22.96■■□□□ 1.27
SSBP4-203ENST00000593641 HDAC4P56524 1084 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 PRRT3Q5FWE3 981 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 C3orf38Q5JPI3 329 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 FKBP15Q5T1M5 1219 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 GDPD4Q6W3E5 623 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 VPS36Q86VN1 386 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 PHACTR4Q8IZ21 702 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 RBFAQ8N0V3 343 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 KCNE4Q8WWG9 221 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 CASKIN2Q8WXE0 1202 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 CENPIQ92674 756 aaPredicted RBP22.96■■□□□ 1.27
SSBP4-203ENST00000593641 NTAN1Q96AB6 310 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 CENPTQ96BT3 561 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 GRAMD1AQ96CP6 724 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 SELENOOQ9BVL4 669 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 VPS16Q9H269 839 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 NLRC4Q9NPP4 1024 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 CHMP5Q9NZZ3 219 aa22.96■■□□□ 1.27
SSBP4-203ENST00000593641 COL27A1Q8IZC6 1860 aaPredicted RBP22.96■■□□□ 1.27
SSBP4-203ENST00000593641 LRRK1Q38SD2 2015 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms