RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 LZTS3O60299 673 aaPredicted RBP24.28■■□□□ 1.48
LSM4-202ENST00000593564 GJB6O95452 261 aa24.28■■□□□ 1.48
LSM4-202ENST00000593564 UGT2B4P06133 528 aa24.28■■□□□ 1.48
LSM4-202ENST00000593564 UNGP13051 313 aaPredicted RBP24.28■■□□□ 1.48
LSM4-202ENST00000593564 GSCP56915 257 aaPredicted RBP24.28■■□□□ 1.48
LSM4-202ENST00000593564 TLE3Q04726 772 aa24.28■■□□□ 1.48
LSM4-202ENST00000593564 PTP4A2Q12974 167 aa24.28■■□□□ 1.48
LSM4-202ENST00000593564 MYLK3Q32MK0 819 aa24.28■■□□□ 1.48
LSM4-202ENST00000593564 TPRG1LQ5T0D9 272 aa24.28■■□□□ 1.48
LSM4-202ENST00000593564 CDKAL1Q5VV42 579 aa24.28■■□□□ 1.48
LSM4-202ENST00000593564 CCDC185Q8N715 623 aa24.28■■□□□ 1.48
LSM4-202ENST00000593564 IFI44Q8TCB0 444 aa24.28■■□□□ 1.48
LSM4-202ENST00000593564 FAM172AQ8WUF8 416 aa24.28■■□□□ 1.48
LSM4-202ENST00000593564 ZNF578Q96N58 590 aaPredicted RBP24.28■■□□□ 1.48
LSM4-202ENST00000593564 MAGEB5Q9BZ81 275 aa24.28■■□□□ 1.48
LSM4-202ENST00000593564 ABCG4Q9H172 646 aa24.28■■□□□ 1.48
LSM4-202ENST00000593564 VPS16Q9H269 839 aa24.28■■□□□ 1.48
LSM4-202ENST00000593564 FAM207AQ9NSI2 230 aaPredicted RBP24.28■■□□□ 1.48
LSM4-202ENST00000593564 KALRNO60229 2985 aa24.28■■□□□ 1.48
LSM4-202ENST00000593564 ZSCAN5CA6NGD5 496 aaPredicted RBP24.27■■□□□ 1.48
LSM4-202ENST00000593564 TK2O00142 265 aa24.27■■□□□ 1.48
LSM4-202ENST00000593564 AREL1O15033 823 aa24.27■■□□□ 1.48
LSM4-202ENST00000593564 EPHB6O15197 1021 aa24.27■■□□□ 1.48
LSM4-202ENST00000593564 AQP9O43315 295 aa24.27■■□□□ 1.48
LSM4-202ENST00000593564 KDELR3O43731 214 aa24.27■■□□□ 1.48
LSM4-202ENST00000593564 CSO75390 466 aaKnown RBP24.27■■□□□ 1.48
LSM4-202ENST00000593564 DXOO77932 396 aaKnown RBP24.27■■□□□ 1.48
LSM4-202ENST00000593564 KRT3P12035 628 aa24.27■■□□□ 1.48
LSM4-202ENST00000593564 JUNDP17535 347 aa24.27■■□□□ 1.48
LSM4-202ENST00000593564 CCDC173Q0VFZ6 552 aa24.27■■□□□ 1.48
LSM4-202ENST00000593564 KRT31Q15323 416 aa24.27■■□□□ 1.48
LSM4-202ENST00000593564 SPACA3Q8IXA5 215 aa24.27■■□□□ 1.48
LSM4-202ENST00000593564 LSMEM2Q8N112 164 aa24.27■■□□□ 1.48
LSM4-202ENST00000593564 MAPK15Q8TD08 544 aa24.27■■□□□ 1.48
LSM4-202ENST00000593564 KLHL32Q96NJ5 620 aa24.27■■□□□ 1.48
LSM4-202ENST00000593564 NLRC4Q9NPP4 1024 aa24.27■■□□□ 1.48
LSM4-202ENST00000593564 ATXN7O15265 892 aaPredicted RBP24.26■■□□□ 1.47
LSM4-202ENST00000593564 MPOP05164 745 aa24.26■■□□□ 1.47
LSM4-202ENST00000593564 TPM2P07951 284 aa24.26■■□□□ 1.47
LSM4-202ENST00000593564 NSFP46459 744 aaKnown RBP24.26■■□□□ 1.47
LSM4-202ENST00000593564 LSSP48449 732 aa24.26■■□□□ 1.47
LSM4-202ENST00000593564 EIF2B5Q13144 721 aaKnown RBP24.26■■□□□ 1.47
LSM4-202ENST00000593564 ATXN7L2Q5T6C5 722 aaPredicted RBP24.26■■□□□ 1.47
LSM4-202ENST00000593564 LEKR1Q6ZMV7 388 aa24.26■■□□□ 1.47
LSM4-202ENST00000593564 ZNF248Q8NDW4 579 aa24.26■■□□□ 1.47
LSM4-202ENST00000593564 CENPTQ96BT3 561 aa24.26■■□□□ 1.47
LSM4-202ENST00000593564 HIC2Q96JB3 615 aa24.26■■□□□ 1.47
LSM4-202ENST00000593564 PCDHB18PQ96TA0 734 aa24.26■■□□□ 1.47
LSM4-202ENST00000593564 ADAM22Q9P0K1 906 aa24.26■■□□□ 1.47
LSM4-202ENST00000593564 SALL4Q9UJQ4 1053 aa24.26■■□□□ 1.47
LSM4-202ENST00000593564 TPP1O14773 563 aa24.25■■□□□ 1.47
LSM4-202ENST00000593564 USP12O75317 370 aa24.25■■□□□ 1.47
LSM4-202ENST00000593564 TMCC1O94876 653 aa24.25■■□□□ 1.47
LSM4-202ENST00000593564 RFC1P35251 1148 aaPredicted RBP24.25■■□□□ 1.47
LSM4-202ENST00000593564 STAT1P42224 750 aa24.25■■□□□ 1.47
LSM4-202ENST00000593564 PCBP4P57723 403 aaKnown RBP24.25■■□□□ 1.47
LSM4-202ENST00000593564 GABREP78334 506 aa24.25■■□□□ 1.47
LSM4-202ENST00000593564 FKBP15Q5T1M5 1219 aa24.25■■□□□ 1.47
LSM4-202ENST00000593564 GDPD4Q6W3E5 623 aa24.25■■□□□ 1.47
LSM4-202ENST00000593564 RTL3Q8N8U3 475 aaKnown RBP24.25■■□□□ 1.47
LSM4-202ENST00000593564 LSM14AQ8ND56 463 aaKnown RBP24.25■■□□□ 1.47
LSM4-202ENST00000593564 LMX1AQ8TE12 382 aa24.25■■□□□ 1.47
LSM4-202ENST00000593564 BTN2A2Q8WVV5 523 aa24.25■■□□□ 1.47
LSM4-202ENST00000593564 CASKIN2Q8WXE0 1202 aa24.25■■□□□ 1.47
LSM4-202ENST00000593564 SLC39A7Q92504 469 aa24.25■■□□□ 1.47
LSM4-202ENST00000593564 GDAP1L1Q96MZ0 367 aa24.25■■□□□ 1.47
LSM4-202ENST00000593564 NOL6Q9H6R4 1146 aaKnown RBP24.25■■□□□ 1.47
LSM4-202ENST00000593564 POLR1BQ9H9Y6 1135 aa24.25■■□□□ 1.47
LSM4-202ENST00000593564 SIK3Q9Y2K2 1263 aa24.25■■□□□ 1.47
LSM4-202ENST00000593564 BUB1O43683 1085 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 GPD1P21695 349 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 RAD51Q06609 339 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 PTK2BQ14289 1009 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 CDKN3Q16667 212 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 DEFB133Q30KQ1 61 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 INO80DQ53TQ3 878 aaPredicted RBP24.24■■□□□ 1.47
LSM4-202ENST00000593564 GUSBP11Q6P575 273 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 GPR155Q7Z3F1 870 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 SLFN11Q7Z7L1 901 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 TTC7BQ86TV6 843 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 PHF13Q86YI8 300 aaPredicted RBP24.24■■□□□ 1.47
LSM4-202ENST00000593564 C3orf20Q8ND61 904 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 TBATAQ96M53 351 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 LGMNQ99538 433 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 IL12RB2Q99665 862 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 SELENOOQ9BVL4 669 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 TTYH3Q9C0H2 523 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 SPASTQ9UBP0 616 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 MFHAS1Q9Y4C4 1052 aa24.24■■□□□ 1.47
LSM4-202ENST00000593564 HELZ2Q9BYK8 2649 aaKnown RBP24.23■■□□□ 1.47
LSM4-202ENST00000593564 TEX51A0A1B0GUA7 166 aa24.23■■□□□ 1.47
LSM4-202ENST00000593564 EME2A4GXA9 379 aaPredicted RBP24.23■■□□□ 1.47
LSM4-202ENST00000593564 CALB1P05937 261 aa24.23■■□□□ 1.47
LSM4-202ENST00000593564 IGFALSP35858 605 aa24.23■■□□□ 1.47
LSM4-202ENST00000593564 THOP1P52888 689 aa24.23■■□□□ 1.47
LSM4-202ENST00000593564 ERVPABLB-1P60509 514 aa24.23■■□□□ 1.47
LSM4-202ENST00000593564 YPEL5P62699 121 aa24.23■■□□□ 1.47
LSM4-202ENST00000593564 CLEC16AQ2KHT3 1053 aa24.23■■□□□ 1.47
LSM4-202ENST00000593564 ISXQ2M1V0 245 aa24.23■■□□□ 1.47
LSM4-202ENST00000593564 WDR59Q6PJI9 974 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms