RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 CCDC14Q49A88 953 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 CDKAL1Q5VV42 579 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 PPP1R2P3Q6NXS1 205 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 ZCCHC8Q6NZY4 707 aaKnown RBP10.3□□□□□ -0.76
VMP1-214ENST00000592106 DNAJC24Q6P3W2 148 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 KDM7AQ6ZMT4 941 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 SLFN11Q7Z7L1 901 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 NLRP14Q86W24 1093 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 DCBLD1Q8N8Z6 715 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 FAM181AQ8N9Y4 354 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 C3orf20Q8ND61 904 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 SLC30A5Q8TAD4 765 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 CXorf40AQ8TE69 158 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 FAM172AQ8WUF8 416 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 ASB12Q8WXK4 309 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 LENG8Q96PV6 779 aaPredicted RBP10.3□□□□□ -0.76
VMP1-214ENST00000592106 UBL7Q96S82 380 aaPredicted RBP10.3□□□□□ -0.76
VMP1-214ENST00000592106 NCAPGQ9BPX3 1015 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 ABCG4Q9H172 646 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 CATSPERBQ9H7T0 1116 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 UCKL1Q9NWZ5 548 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 TSR3Q9UJK0 312 aaKnown RBP10.3□□□□□ -0.76
VMP1-214ENST00000592106 CSNK1G3Q9Y6M4 447 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 ZFHX4Q86UP3 3567 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 CEP295Q9C0D2 2601 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 SPTY2D1-AS1A0A0U1RR47 76 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 C16orf96A6NNT2 1141 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 GOLGA6L22H0YM25 854 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 BUB1O43683 1085 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 BRINP1O60477 761 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 ZNF821O75541 412 aaPredicted RBP10.29□□□□□ -0.76
VMP1-214ENST00000592106 UGT2B4P06133 528 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 EPHB2P29323 1055 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 ANP32AP39687 249 aaKnown RBP10.29□□□□□ -0.76
VMP1-214ENST00000592106 EIF2S3P41091 472 aaKnown RBP10.29□□□□□ -0.76
VMP1-214ENST00000592106 RPIAP49247 311 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 SUOXP51687 545 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 THOP1P52888 689 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 COPB1P53618 953 aaKnown RBP10.29□□□□□ -0.76
VMP1-214ENST00000592106 RHOAP61586 193 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 ELP6Q0PNE2 266 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 PDE1CQ14123 709 aaPredicted RBP10.29□□□□□ -0.76
VMP1-214ENST00000592106 GRM3Q14832 879 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 CLEC16AQ2KHT3 1053 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 TBC1D25Q3MII6 688 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 SWT1Q5T5J6 900 aaKnown RBP10.29□□□□□ -0.76
VMP1-214ENST00000592106 CFAP58Q5T655 872 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 SASS6Q6UVJ0 657 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 GDPD4Q6W3E5 623 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 PHF13Q86YI8 300 aaPredicted RBP10.29□□□□□ -0.76
VMP1-214ENST00000592106 LSMEM2Q8N112 164 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 SLC22A18ASQ8N1D0 253 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 SLC25A45Q8N413 288 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 RTL3Q8N8U3 475 aaKnown RBP10.29□□□□□ -0.76
VMP1-214ENST00000592106 ZNF548Q8NEK5 533 aaPredicted RBP10.29□□□□□ -0.76
VMP1-214ENST00000592106 OR6K2Q8NGY2 324 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 TPCN2Q8NHX9 752 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 JOSD2Q8TAC2 188 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 GPT2Q8TD30 523 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 FGF11Q92914 225 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 APOLD1Q96LR9 279 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 TBATAQ96M53 351 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 GBP4Q96PP9 640 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 IL12RB2Q99665 862 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 GPR27Q9NS67 375 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 ANO10Q9NW15 660 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 SPASTQ9UBP0 616 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 FRYQ5TBA9 3013 aa10.29□□□□□ -0.76
VMP1-214ENST00000592106 KNL1Q8NG31 2342 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 GOLGA4Q13439 2230 aaKnown RBP10.28□□□□□ -0.76
VMP1-214ENST00000592106 POM121BA6NF01 834 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 IGLON5A6NGN9 336 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 LGALS16A8MUM7 142 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 K7ESM1 405 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 FGF10O15520 208 aaPredicted RBP10.28□□□□□ -0.76
VMP1-214ENST00000592106 AQP9O43315 295 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 KDELR3O43731 214 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 OPA1O60313 960 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 TM7SF2O76062 418 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 TMCC1O94876 653 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 UNGP13051 313 aaPredicted RBP10.28□□□□□ -0.76
VMP1-214ENST00000592106 JUNDP17535 347 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 CHRNB2P17787 502 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 HTR7P34969 479 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 ABL2P42684 1182 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 KLK7P49862 253 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 HDAC4P56524 1084 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 PCBP4P57723 403 aaKnown RBP10.28□□□□□ -0.76
VMP1-214ENST00000592106 YBEYP58557 167 aaPredicted RBP10.28□□□□□ -0.76
VMP1-214ENST00000592106 YPEL5P62699 121 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 MYL5Q02045 173 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 FGL2Q14314 439 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 FZD2Q14332 565 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 STX1AQ16623 288 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 MYLK3Q32MK0 819 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 PARP15Q460N3 678 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 SOWAHCQ53LP3 525 aaPredicted RBP10.28□□□□□ -0.76
VMP1-214ENST00000592106 INO80DQ53TQ3 878 aaPredicted RBP10.28□□□□□ -0.76
VMP1-214ENST00000592106 BROXQ5VW32 411 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 SCYL2Q6P3W7 929 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms