RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 KLHL32Q96NJ5 620 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 CPEB1Q9BZB8 566 aaKnown RBP9.32□□□□□ -0.92
DNMT1-223ENST00000591239 SP110Q9HB58 689 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 AASDHPPTQ9NRN7 309 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 KLHL11Q9NVR0 708 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 IPO11Q9UI26 975 aaKnown RBP9.32□□□□□ -0.92
DNMT1-223ENST00000591239 ANKRD6Q9Y2G4 727 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 PCDHA13Q9Y5I0 950 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 FADS3Q9Y5Q0 445 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 CNOT1A5YKK6 2376 aaKnown RBP9.32□□□□□ -0.92
DNMT1-223ENST00000591239 SPTBN2O15020 2390 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 ASCC3Q8N3C0 2202 aaKnown RBP9.31□□□□□ -0.92
DNMT1-223ENST00000591239 A0A1W2PQU0 124 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 SOWAHDA6NJG2 315 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 WNT9AO14904 365 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 VILLO15195 856 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 INSIG1O15503 277 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 AP1G1O43747 822 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 MAFKO60675 156 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 RNGTTO60942 597 aaKnown RBP9.31□□□□□ -0.92
DNMT1-223ENST00000591239 NDUFA10O95299 355 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 CER1O95813 267 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 WNT1P04628 370 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 KDELR1P24390 212 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 NOP2P46087 812 aaKnown RBP9.31□□□□□ -0.92
DNMT1-223ENST00000591239 C21orf59P57076 290 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 NSUN2Q08J23 767 aaKnown RBP eCLIP9.31□□□□□ -0.92
DNMT1-223ENST00000591239 SLC14A1Q13336 389 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 GRM3Q14832 879 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 KIF19Q2TAC6 998 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 ZNF284Q2VY69 593 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 HLA-BQ31612 363 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 SETMARQ53H47 684 aaPredicted RBP9.31□□□□□ -0.92
DNMT1-223ENST00000591239 ANKRD20A8PQ5CZ79 823 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 PPM1JQ5JR12 505 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 ZFYVE27Q5T4F4 411 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 NAPEPLDQ6IQ20 393 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 TTC7BQ86TV6 843 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 HORMAD1Q86X24 394 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 TMTC1Q8IUR5 882 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 PCDH19Q8TAB3 1148 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 RAPGEF5Q92565 580 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 KLK6Q92876 244 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 RAB7BQ96AH8 199 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 SKA1Q96BD8 255 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 FEM1CQ96JP0 617 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 ZNF599Q96NL3 588 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 ZNF670Q9BS34 389 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 CINPQ9BW66 212 aaPredicted RBP9.31□□□□□ -0.92
DNMT1-223ENST00000591239 GAREM1Q9H706 876 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 IL21RQ9HBE5 538 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 LUC7LQ9NQ29 371 aaKnown RBP9.31□□□□□ -0.92
DNMT1-223ENST00000591239 SEPT3Q9UH03 358 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 ZFR2Q9UPR6 939 aaKnown RBP9.31□□□□□ -0.92
DNMT1-223ENST00000591239 DMTF1Q9Y222 760 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 SNX11Q9Y5W9 270 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 EPN1Q9Y6I3 576 aaPredicted RBP9.31□□□□□ -0.92
DNMT1-223ENST00000591239 PLXNA2O75051 1894 aa9.31□□□□□ -0.92
DNMT1-223ENST00000591239 A0A1W2PR77 199 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 UPK3BL1B0FP48 263 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 UPK3BL2E5RIL1 263 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 PRAMEF26H0Y7S4 382 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 NEMP1O14524 444 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 MUSKO15146 869 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 SLC31A1O15431 190 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 TSPAN6O43657 245 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 MFSD11O43934 449 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 BUB1BO60566 1050 aaPredicted RBP9.3□□□□□ -0.92
DNMT1-223ENST00000591239 KCNK5O95279 499 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 PIGNO95427 931 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 PEX11BO96011 259 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 CD59P13987 128 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 PRLRP16471 622 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 CDC25BP30305 580 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 ABL2P42684 1182 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 SLC1A1P43005 524 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 CTSKP43235 329 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 RGRP47804 291 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 CSNK1DP48730 415 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 RENBPP51606 427 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 HADHBP55084 474 aaKnown RBP9.3□□□□□ -0.92
DNMT1-223ENST00000591239 RPS21P63220 83 aaKnown RBP9.3□□□□□ -0.92
DNMT1-223ENST00000591239 FOXK2Q01167 660 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 SLC10A7Q0GE19 358 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 LBRQ14739 615 aaKnown RBP9.3□□□□□ -0.92
DNMT1-223ENST00000591239 STAT4Q14765 748 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 PAFAH1B3Q15102 231 aaKnown RBP9.3□□□□□ -0.92
DNMT1-223ENST00000591239 TMEM259Q4ZIN3 620 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 TMCO4Q5TGY1 634 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 LRRC38Q5VT99 294 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 SEL1L3Q68CR1 1132 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 NCBP2-AS2Q69YL0 99 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 KIAA1161Q6NSJ0 714 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 PSAPL1Q6NUJ1 521 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 PIP4P1Q86T03 277 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 SRLQ86TD4 932 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 LRRC49Q8IUZ0 686 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 ATPAF2Q8N5M1 289 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 MFSD2AQ8NA29 543 aa9.3□□□□□ -0.92
DNMT1-223ENST00000591239 FAF2Q96CS3 445 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms