RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 SLC10A7Q0GE19 358 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 SHBQ15464 509 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 NCBP2-AS2Q69YL0 99 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 NAPEPLDQ6IQ20 393 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 TMCO3Q6UWJ1 677 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 GDPD4Q6W3E5 623 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 HORMAD1Q86X24 394 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 PGBD5Q8N414 524 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 LZTR1Q8N653 840 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 PQLC3Q8N755 202 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 TMEM145Q8NBT3 493 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 DEFB124Q8NES8 71 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 RAPGEF5Q92565 580 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 PPP1R16AQ96I34 528 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 SERAC1Q96JX3 654 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 CAMK1GQ96NX5 476 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 GAREM1Q9H706 876 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 FZD3Q9NPG1 666 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 DONSONQ9NYP3 566 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 RCOR3Q9P2K3 495 aaPredicted RBP18.47■□□□□ 0.55
DDX39A-212ENST00000590260 INTUQ9ULD6 942 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 REXO2Q9Y3B8 237 aaKnown RBP18.47■□□□□ 0.55
DDX39A-212ENST00000590260 HYOU1Q9Y4L1 999 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 TTC24A2A3L6 582 aaPredicted RBP18.46■□□□□ 0.55
DDX39A-212ENST00000590260 RCCD1A6NED2 376 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 SOWAHDA6NJG2 315 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 C3orf70A6NLC5 250 aaPredicted RBP18.46■□□□□ 0.55
DDX39A-212ENST00000590260 H0Y8X5 98 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 AREL1O15033 823 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 AP1G1O43747 822 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 TIMP2P16035 220 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 CSRP1P21291 193 aaKnown RBP18.46■□□□□ 0.55
DDX39A-212ENST00000590260 CD38P28907 300 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 ATXN3P54252 364 aaPredicted RBP18.46■□□□□ 0.55
DDX39A-212ENST00000590260 HADHQ16836 314 aaKnown RBP18.46■□□□□ 0.55
DDX39A-212ENST00000590260 ZNF423Q2M1K9 1284 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 ANKRD20A8PQ5CZ79 823 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 PRAMEF14Q5SWL7 426 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 PSAPL1Q6NUJ1 521 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 NEK5Q6P3R8 708 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 DBX2Q6ZNG2 339 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 SPATS2Q86XZ4 545 aaKnown RBP18.46■□□□□ 0.55
DDX39A-212ENST00000590260 TMEM139Q8IV31 216 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 PANX2Q96RD6 677 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 CPEB1Q9BZB8 566 aaKnown RBP18.46■□□□□ 0.55
DDX39A-212ENST00000590260 DYRK4Q9NR20 520 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 SALL4Q9UJQ4 1053 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 ANKRD36A6QL64 1941 aa18.46■□□□□ 0.55
DDX39A-212ENST00000590260 TSPAN11A1L157 253 aa18.45■□□□□ 0.54
DDX39A-212ENST00000590260 MAP3K6O95382 1288 aa18.45■□□□□ 0.54
DDX39A-212ENST00000590260 SLC10A2Q12908 348 aaPredicted RBP18.45■□□□□ 0.54
DDX39A-212ENST00000590260 KRT81Q14533 505 aa18.45■□□□□ 0.54
DDX39A-212ENST00000590260 PAFAH1B3Q15102 231 aaKnown RBP18.45■□□□□ 0.54
DDX39A-212ENST00000590260 N4BP2L1Q5TBK1 243 aaPredicted RBP18.45■□□□□ 0.54
DDX39A-212ENST00000590260 FBXL19Q6PCT2 694 aa18.45■□□□□ 0.54
DDX39A-212ENST00000590260 RAD9BQ6WBX8 426 aa18.45■□□□□ 0.54
DDX39A-212ENST00000590260 KDM7AQ6ZMT4 941 aa18.45■□□□□ 0.54
DDX39A-212ENST00000590260 PRPF39Q86UA1 669 aaKnown RBP18.45■□□□□ 0.54
DDX39A-212ENST00000590260 RHOT2Q8IXI1 618 aa18.45■□□□□ 0.54
DDX39A-212ENST00000590260 LRRN4Q8WUT4 740 aa18.45■□□□□ 0.54
DDX39A-212ENST00000590260 MYOCQ99972 504 aa18.45■□□□□ 0.54
DDX39A-212ENST00000590260 ZNF670Q9BS34 389 aa18.45■□□□□ 0.54
DDX39A-212ENST00000590260 OSBPL1AQ9BXW6 950 aa18.45■□□□□ 0.54
DDX39A-212ENST00000590260 GOLPH3Q9H4A6 298 aa18.45■□□□□ 0.54
DDX39A-212ENST00000590260 SP110Q9HB58 689 aa18.45■□□□□ 0.54
DDX39A-212ENST00000590260 AASDHPPTQ9NRN7 309 aa18.45■□□□□ 0.54
DDX39A-212ENST00000590260 LRRK1Q38SD2 2015 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 RAD51BO15315 384 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 SLC31A1O15431 190 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 SH3BP5O60239 455 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 PALMO75781 387 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 PCDH8O95206 1070 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 ADRB1P08588 477 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 CR2P20023 1033 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 KDELR1P24390 212 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 ARHGAP25P42331 645 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 MAGEA1P43355 309 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 CSNK1DP48730 415 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 NOVA1P51513 510 aaKnown RBP18.44■□□□□ 0.54
DDX39A-212ENST00000590260 HADHBP55084 474 aaKnown RBP18.44■□□□□ 0.54
DDX39A-212ENST00000590260 NXPH1P58417 271 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 LBRQ14739 615 aaKnown RBP18.44■□□□□ 0.54
DDX39A-212ENST00000590260 TEAD4Q15561 434 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 GCNT7Q6ZNI0 430 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 SRLQ86TD4 932 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 CAMK1DQ8IU85 385 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 PSKH2Q96QS6 385 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 KLF6Q99612 283 aaPredicted RBP18.44■□□□□ 0.54
DDX39A-212ENST00000590260 CALN1Q9BXU9 219 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 TM7SF3Q9NS93 570 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 DKK3Q9UBP4 350 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 TPX2Q9ULW0 747 aaKnown RBP18.44■□□□□ 0.54
DDX39A-212ENST00000590260 DMTF1Q9Y222 760 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 PCDHA13Q9Y5I0 950 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 SHROOM3Q8TF72 1996 aa18.44■□□□□ 0.54
DDX39A-212ENST00000590260 CBFA2T3O75081 653 aa18.43■□□□□ 0.54
DDX39A-212ENST00000590260 CER1O95813 267 aa18.43■□□□□ 0.54
DDX39A-212ENST00000590260 KRT7P08729 469 aa18.43■□□□□ 0.54
DDX39A-212ENST00000590260 ZNF883P0CG24 379 aa18.43■□□□□ 0.54
DDX39A-212ENST00000590260 SLC14A1Q13336 389 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms